XLOC_022625


Basic Information

Item Value
gene id XLOC_022625
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 42622345 ~ 42627442 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045132
TGGAGATTAATTCAGCAAGTCTCTCTTTACATTCGATTCAATCATATGAAGAAAGTGTTTCACTATTATAGGACGTTTATGAAGATCACTCTAGGTAAAATTAAtatccaaaataaaatgaaagcaatcCTTCTTTAGATGAATAATGATGCAGTGTGATGTGAGTTTTGAGTATGAATGATAATAAACCATACCTGATTTCAAATGAACGTCTATTTATAACAAAAAACAGCCTTCCCGGAGGAAAAAGTAGTCCCACATAGACTAAATGCGATCTTTACGACGTTCATAAAAAGTCGTCGATAAATATATCCCTCAGCAGGTTATATCTATTCGTCCTTTGCATTCGTCTTATTAAAACCCCCAAATTCATGTCATTCTCAAAGAAAGAGTTTCCATATGAAAAAGGTCACCCAAGACGATCGTTCTAGTCCACAAAAAGTCCTTAAGAGTAATAATAATATCCCTCAGCAGTCGACGAGCCGATCAAACATGCCGTCAACGCGTCAGCATTTTCCTCAAACACGCGCGTCAATTTTTCTATCCTGGGGGTGGGAGATTCAAAGCTGAACGCGTTGAGGATGGTAACGAGGGTCGGATTAAGCGAATCTCACCCCGTGCTGACCTGAAAAACGGTTTTTCGCATCCTTTTCCCCCCTCTCAAGGTAGCGTAAGGACGCCGCGCCACTCTCTGCCCGTCACCACCGAGAGCGCGCGCAAATCAGCACTGAAGGGAGCGCGTGAGGAATCCTCATTCACAAAACCCCGGAGGAGGTCATCCCGTCTGCGCTTGTCAATTACCTCCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045132 True 807 lncRNA 0.43 2 42622345 42627442

Neighbor

gene id symbol gene type direction distance location
XLOC_022624 CT997819.3 coding downstream 107343 42508734 ~ 42515002 (-)
XLOC_022622 NA coding downstream 167806 42362045 ~ 42454539 (-)
XLOC_022623 CU013526.2 coding downstream 218665 42403564 ~ 42403680 (-)
XLOC_022621 NA coding downstream 287354 42331919 ~ 42334991 (-)
XLOC_022620 gpx7 coding downstream 390221 42219613 ~ 42232124 (-)
XLOC_022626 si:ch73-217n20.1 coding upstream 98719 42726161 ~ 42752550 (-)
XLOC_022627 pfkfb2a coding upstream 138258 42765700 ~ 42810664 (-)
XLOC_022628 NA coding upstream 201191 42828633 ~ 42831162 (-)
XLOC_022629 dlgap4a coding upstream 208683 42836125 ~ 42883522 (-)
XLOC_022630 CABZ01066224.1 coding upstream 257161 42884603 ~ 42906528 (-)
XLOC_022618 NA non-coding downstream 684366 41937004 ~ 41937979 (-)
XLOC_022631 BX004770.1 non-coding upstream 393752 43021194 ~ 43125946 (-)
XLOC_022632 CR545469.1 non-coding upstream 616649 43244091 ~ 43289451 (-)
XLOC_022637 CABZ01117597.1 non-coding upstream 903159 43530601 ~ 43530715 (-)

Expression


Co-expression Network