XLOC_022632 (CR545469.1)


Basic Information

Item Value
gene id XLOC_022632
gene name CR545469.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 43244091 ~ 43289451 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044565
CTGGAGTGAAGCAATGATGAAACTGATGACCTTCGACGTCCTGTGGAGCAGACGCTGGGAGACATCGAGCCCCGCCCTGAAGAAGAAGATGATTGGCTGCCTGCAGTTGATGTGGTGCTGCCAGAGCCAATGGAATCTGGCCGTGGTAAAGCCCCGCCCCTCTGAAGGCCAGACACCAGAGGATTGGGTGTTTTCAGTATTCCTACGAGTTCTGTCAGAAGAGAAAAGTCACAGAAAGTTCAGtgtgtgattggctgataaataCCTCTTCCTGTGACATCACCATTCACAgtgtgattgacagctgcgttTCTGGGCTGAATGTCTACAAAAGGTTTGCAGCCGGTTCCCATGAACAACCTCTCCTGTCTCCTCAACTCTGAAACACAAAAATCAGCAAGTCTTGTCAATCTGTGGAGATATATCCTCAAACAATTGTG
>TCONS_00045137
CGCCAAAAAGTGCGCGAATAAAGTTCTGACGTAGGAGCCGTTCAGTAATGGCGTCGGTCAGTGTTGCTGGAAGATTACCGGCGTCTTTCTTCGTCCTGGACGCTTCAGAGCCTTCAGCACCATCAAGCAGCTGAACACTTTAATGCTCAAAAAAATAACAAGCTCTGGCAAAAGTAACTGATGAAGTTGAATGATGCTCACTGACACAATCAAGCTTGAACAGATGACCAGAATCCACCCAAAGACTGAGAAGGAGATCCTGTATTTCATGGGTTTGAGCTTCAGGAAAGTCACAGGATGGAAAACCGCGATGTATCGCTCCACACAGATGCAACTTTGAAACAGAGGACGACCCACCACCAGCACGACTCCAGGAAAGTATACTCCAAACTTGCATTGAGTACAATTAAAGAAGTACTGCTGTATGATAAACACAAAAGAGGCGCAGAAGACGATCTCGACAAGTGCTGTGTTGAAGACGAAGATTTCAGTGGACTGTCCTTGAATCATCTCCTTCACGCTCAGCCAAAGGACATAACAGTTTGCTGGAAGACCAAGAGCTATGTTGATGCTGATGGAGACGGCGATAAAATAGGAGGGGAAAACATAGCACGAGCTGGAGTTCACAGAGAAAACTGATGGTTTTCACTCTGTCTTCAGtgaaacaaaccaaacaaagcGTTACTGGCAGAAGAAAGCTCCACTCAGTCCAGTGAAGATCCAGAACTTCCAGAAACAGCAGGAAGATGCCCATGCAGTTCCTCAAATCTGCCTTTCAAGATGACAAGTTAGATGATTGGTCCACAGATGAGGGCAGGAGAGCTGTAATGGATGGAGTGAGCAGGTGACGCTGAAGATCTGGAGTGAAGCAATGATGAAACTGATGACCTTCGACGTCCTGTGGAGCAGACGCTGGGAGACATCGAGCCCCGCCCTGAAGAAGAAGATGATTGGCTGCCTGCAGTTGATGTGGTGCTGCCAGAGCCAATGGAATCTGGCCGTGGTAAAGCCCCGCCCCTCTGAAGGCCAGACACCAGAGGATTGGGTGTTTTCAGTATTCCTACGAGTTCTGTCAGAAGAGAAAAGTCACAGAAAGTTCAGtgtgtgattggctgataaataCCTCTTCCTGTGACATCACCATTCACAgtgtgattgacagctgcgttTCTGGGCTGAATGTCTACAAAAGGTTTGCAGCCGGTTCCCATGAACAACCTCTCCTGTCTCCTCAACTCTGAAACACAAAAATCAGCAAGTCTTGTCAATCTGTGGAGATATATCCTCAAACAATTGTG
>TCONS_00045136
CGCCAAAAAGTGCGCGAATAAAGTTCTGACGTAGGAGCCGTTCAGTAATGGCGTCGGTCAGTGTTGCTGGAAGATTACCGGCGTCTTTCTTCGTCCTGGACGCTTCAGAGCCTTCAGCACCATCAAGCAGCTGAACACTTTAATGCTCAAAAAAATAACAAGCTCTGGCAAAAGTAACTGATGAAGTTGAATGATGCTCACTGACACAATCAAGCTTGAACAGATGACCAGAATCCACCCAAAGACTGAGAAGGAGATCCTGTATTTCATGGGTTTGAGCTTCAGGAAAGTCACAGGATGGAAAACCGCGATGTATCGCTCCACACAGATGCAACTTTGAAACAGAGGACGACCCACCACCAGCACGACTCCAGGAAAGTATACTCCAAACTTGCATTGAGTACAATTAAAGAAGTACTGCTGTATGATAAACACAAAAGAGGCGCAGAAGACGATCTCGACAAGTGCTGTGTTGAAGACGAAGATTTCAGTGGACTGTCCTTGAATCATCTCCTTCACGCTCAGCCAAAGGACATAACAGTTTGCTGGAAGACCAAGAGCTATGTTGATGCTGATGGAGACGGCGATAAAATAGGAGGGGAAAACATAGCACGAGCTGGAGTTCACAGAGAAAACTGATGGTTTTCACTCTGTCTTCAGtgaaacaaaccaaacaaagcGTTACTGGCAGAAGAAAGCTCCACTCAGTCCAGTGAAGgcaaaggagaaagaaatgattgaggaacaggcagggcagggtcagtcagatgtgcagtgtcagTTTGATGTACTCCACCACGTCAGCGTTCACCTCCGCATACACGAACGGGACGTCGAATTTGAAGCGATGGATGAATGACCTGTGCAGGCGACAGCAGCAAACACCCAGCACTGTCCGTAACGCACCGCCCTGCAGCCCTCATTACTCCACTGACGGAGGATCGAGCAGCTGTCCTTCCACACGATGACATTACAAAGTCTTAGCTGTGGATGTTTATCGTGATGCTTAAGATGGTTAATGCTCTGCGTGTGGCTCGTGTTGGGTCGTCTTCAGCTGGTGTTGGGGTCACTGAGGGATATTTTGGGCTTTGCGTCCTAATGTTACGCTGGTGTCAGAGGACCAAGACTTCAAACCCCGGCGCTTATTTGTGACATTTCCGTCTTCTACCAAACACTGACGGCATTAAATCACATTACAGCATGTCATGTTACATCCAGAACTTCCAGAAACAGCAGGAAGATGCCCATGCAGTTCCTCAAATCTGCCTTTCAAGATGACAAGTTAGATGATTGGTCCACAGATGAGGGCAGGAGAGCTGTAATGGATGGAGTGAGCAGGTGACGCTGAAGATCTGGAGTGAAGCAATGATGAAACTGATGACCTTCGACGTCCTGTGGAGCAGACGCTGGGAGACATCGAGCCCCGCCCTGAAGAAGAAGATGATTGGCTGCCTGCAGTTGATGTGGTGCTGCCAGAGCCAATGGAATCTGGCCGTGGTAAAGCCCCGCCCCTCTGAAGGCCAGACACCAGAGGATTGGGTGTTTTCAGTATTCCTACGAGTTCTGTCAGAAGAGAAAAGTCACAGAAAGTTCAGtgtgtgattggctgataaataCCTCTTCCTGTGACATCACCATTCACAgtgtgattgacagctgcgttTCTGGGCTGAATGTCTACAAAAGGTTTGCAGCCGGTTCCCATGAACAACCTCTCCTGTCTCCTCAACTCTGAAACACAAAAATCAGCAAGTCTTGTCAATCTGTGGAGATATATCCTCAAACAATTGTG
>TCONS_00045135
CGCCAAAAAGTGCGCGAATAAAGTTCTGACGTAGGAGCCGTTCAGTAATGGCGTCGGTCAGTGTTGCTGGAAGATTACCGGCGTCTTTCTTCGTCCTGGACGCTTCAGAGCCTTCAGCACCATCAAGCAGCTGAACACTTTAATGCTCAAAAAAATAACAAGCTCTGGCAAAAGTAACTGATGAAGTTGAATGATGCTCACTGACACAATCAAGCTTGAACAGATGACCAGAATCCACCCAAAGACTGAGAAGGAGATCCTGTATTTCATGGGTTTGAGCTTCAGGAAAGTCACAGGATGGAAAACCGCGATGTATCGCTCCACACAGATGCAACTTTGAAACAGAGGACGACCCACCACCAGCACGACTCCAGGAAAGTATACTCCAAACTTGCATTGAGTACAATTAAAGAAGTACTGCTGTATGATAAACACAAAAGAGGCGCAGAAGACGATCTCGACAAGTGCTGTGTTGAAGACGAAGATTTCAGTGGACTGTCCTTGAATCATCTCCTTCACGCTCAGCCAAAGGACATAACAGTTTGCTGGAAGACCAAGAGCTATGTTGATGCTGATGGAGACGGCGATAAAATAGGAGGGGAAAACATAGCACGAGCTGGAGTTCACAGAGAAAACTGATGGTTTTCACTCTGTCTTCAGtgaaacaaaccaaacaaagcGTTACTGGCAGAAGAAAGCTCCACTCAGTCCAGTGAAGTTTGATGTACTCCACCACGTCAGCGTTCACCTCCGCATACACGAACGGGACGTCGAATTTGAAGCGATGGATGAATGACCTGTGCAGGCGACAGCAGCAAACACCCAGCACTGTCCGTAACGCACCGCCCTGCAGCCCTCATTACTCCACTGACGGAGGATCGAGCAGCTGTCCTTCCACACGATGACATTACAAAGTCTTAGCTGTGGATGTTTATCGTGATGCTTAAGATCCAGAACTTCCAGAAACAGCAGGAAGATGCCCATGCAGTTCCTCAAATCTGCCTTTCAAGATGACAAGTTAGATGATTGGTCCACAGATGAGGGCAGGAGAGCTGTAATGGATGGAGTGAGCAGGTGACGCTGAAGATCTGGAGTGAAGCAATGATGAAACTGATGACCTTCGACGTCCTGTGGAGCAGACGCTGGGAGACATCGAGCCCCGCCCTGAAGAAGAAGATGATTGGCTGCCTGCAGTTGATGTGGTGCTGCCAGAGCCAATGGAATCTGGCCGTGGTAAAGCCCCGCCCCTCTGAAGGCCAGACACCAGAGGATTGGGTGTTTTCAGTATTCCTACGAGTTCTGTCAGAAGAGAAAAGTCACAGAAAGTTCAGtgtgtgattggctgataaataCCTCTTCCTGTGACATCACCATTCACAgtgtgattgacagctgcgttTCTGGGCTGAATGTCTACAAAAGGTTTGCAGCCGGTTCCCATGAACAACCTCTCCTGTCTCCTCAACTCTGAAACACAAAAATCAGCAAGTCTTGTCAATCTGTGGAGATATATCCTCAAACAATTGTG
>TCONS_00045134
CGCCAAAAAGTGCGCGAATAAAGTTCTGACGTAGGAGCCGTTCAGTAATGGCGTCGGTCAGTGTTGCTGGAAGATTACCGGCGTCTTTCTTCGTCCTGGACGCTTCAGAGCCTTCAGCACCATCAAGCAGCTGAACACTTTAATGCTCAAAAAAATAACAAGCTCTGGCAAAAGTAACTGATGAAGTTGAATGATGCTCACTGACACAATCAAGCTTGAACAGATGACCAGAATCCACCCAAAGACTGAGAAGGAGATCCTGTATTTCATGGGTTTGAGCTTCAGGAAAGTCACAGGATGGAAAACCGCGATGTATCGCTCCACACAGATGCAACTTTGAAACAGAGGACGACCCACCACCAGCACGACTCCAGGAAAGTATACTCCAAACTTGCATTGAGTACAATTAAAGAAGTACTGCTGTATGATAAACACAAAAGAGGCGCAGAAGACGATCTCGACAAGTGCTGTGTTGAAGACGAAGATTTCAGTGGACTGTCCTTGAATCATCTCCTTCACGCTCAGCCAAAGGACATAACAGTTTGCTGGAAGACCAAGAGCTATGTTGATGCTGATGGAGACGGCGATAAAATAGGAGGGGAAAACATAGCACGAGCTGGAGTTCACAGAGAAAACTGATGGTTTTCACTCTGTCTTCAGtgaaacaaaccaaacaaagcGTTACTGGCAGAAGAAAGCTCCACTCAGTCCAGTGAAGgcaaaggagaaagaaatgattgaggaacaggcagggcagggtcagtcagatgtgcagtgtcagGGCAGGAGAGCTGTAATGGATGGAGTGAGCAGGTGACGCTGAAGATCTGGAGTGAAGCAATGATGAAACTGATGACCTTCGACGTCCTGTGGAGCAGACGCTGGGAGACATCGAGCCCCGCCCTGAAGAAGAAGATGATTGGCTGCCTGCAGTTGATGTGGTGCTGCCAGAGCCAATGGAATCTGGCCGTGGTAAAGCCCCGCCCCTCTGAAGGCCAGACACCAGAGGATTGGGTGTTTTCAGTATTCCTACGAGTTCTGTCAGAAGAGAAAAGTCACAGAAAGTTCAGtgtgtgattggctgataaataCCTCTTCCTGTGACATCACCATTCACAgtgtgattgacagctgcgttTCTGGGCTGAATGTCTACAAAAGGTTTGCAGCCGGTTCCCATGAACAACCTCTCCTGTCTCCTCAACTCTGAAACACAAAAATCAGCAAGTCTTGTCAATCTGTGGAGATATATCCTCAAACAATTGTG
>TCONS_00045138
CGCCAAAAAGTGCGCGAATAAAGTTCTGACGTAGGAGCCGTTCAGTAATGGCGTCGGTCAGTGTTGCTGGAAGATTACCGGCGTCTTTCTTCGTCCTGGACGCTTCAGAGCCTTCAGCACCATCAAGCAGCTGAACACTTTAATGCTCAAAAAAATAACAAGCTCTGGCAAAAGTAACTGATGAAGTTGAATGATGCTCACTGACACAATCAAGCTTGAACAGATGACCAGAATCCACCCAAAGACTGAGAAGGAGATCCTGTATTTCATGGGTTTGAGCTTCAGGAAAGTCACAGGATGGAAAACCGCGATGTATCGCTCCACACAGATGCAACTTTGAAACAGAGGACGACCCACCACCAGCACGACTCCAGGAAAGTATACTCCAAACTTGCATTGAGTACAATTAAAGAAGTACTGCTGTATGATAAACACAAAAGAGGCGCAGAAGACGATCTCGACAAGTGCTGTGTTGAAGACGAAGATTTCAGTGGACTGTCCTTGAATCATCTCCTTCACGCTCAGCCAAAGGACATAACAGTTTGCTGGAAGACCAAGAGCTATGTTGATGCTGATGGAGACGGCGATAAAATAGGAGGGGAAAACATAGCACGAGCTGGAGTTCACAGAGAAAACTGATGGTTTTCACTCTGTCTTCAGtgaaacaaaccaaacaaagcGTTACTGGCAGAAGAAAGCTCCACTCAGTCCAGTGAAGGTAAAGCTACTCAGTTGGACCAGC

Function

GO:

id name namespace
GO:0048477 oogenesis biological_process
GO:1905516 positive regulation of fertilization biological_process
GO:0009566 fertilization biological_process
GO:0035803 egg coat formation biological_process
GO:0043902 positive regulation of multi-organism process biological_process
GO:0035036 sperm-egg recognition biological_process
GO:0080154 regulation of fertilization biological_process
GO:2000243 positive regulation of reproductive process biological_process
GO:0007338 single fertilization biological_process
GO:0007339 binding of sperm to zona pellucida biological_process
GO:0007340 acrosome reaction biological_process
GO:0009988 cell-cell recognition biological_process
GO:2000344 positive regulation of acrosome reaction biological_process
GO:0060046 regulation of acrosome reaction biological_process
GO:0032190 acrosin binding molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096947

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044565 False 440 lncRNA 0.49 3 43244091 43247121
TCONS_00045137 False 1298 lncRNA 0.47 7 43244091 43289451
TCONS_00045136 False 1792 lncRNA 0.48 12 43244091 43289451
TCONS_00045135 False 1528 lncRNA 0.48 10 43244091 43289451
TCONS_00045134 False 1267 lncRNA 0.47 7 43244091 43289451
TCONS_00045138 True 742 lncRNA 0.46 4 43270478 43289451

Neighbor

gene id symbol gene type direction distance location
XLOC_022631 BX004770.1 coding downstream 118145 43021194 ~ 43125946 (-)
XLOC_022630 CABZ01066224.1 coding downstream 337563 42884603 ~ 42906528 (-)
XLOC_022629 dlgap4a coding downstream 360569 42836125 ~ 42883522 (-)
XLOC_022628 NA coding downstream 412929 42828633 ~ 42831162 (-)
XLOC_022627 pfkfb2a coding downstream 433427 42765700 ~ 42810664 (-)
XLOC_022633 si:rp71-80o10.4 coding upstream 11441 43300892 ~ 43307237 (-)
XLOC_022634 zgc:174862 coding upstream 31452 43320903 ~ 43393589 (-)
XLOC_022635 rprd1b coding upstream 115754 43405205 ~ 43454523 (-)
XLOC_022636 e2f1 coding upstream 178348 43467799 ~ 43486714 (-)
XLOC_022637 CABZ01117597.1 coding upstream 241150 43530601 ~ 43530715 (-)
XLOC_022625 NA non-coding downstream 616649 42622345 ~ 42627442 (-)
XLOC_022624 CT997819.3 non-coding downstream 729089 42508734 ~ 42515002 (-)
XLOC_022640 NA non-coding upstream 375961 43665412 ~ 43668843 (-)
XLOC_022642 NA non-coding upstream 594418 43883869 ~ 43884804 (-)
XLOC_022643 NA non-coding upstream 639047 43928498 ~ 43930231 (-)
XLOC_022644 NA non-coding upstream 699788 43989239 ~ 43992522 (-)

Expression


Co-expression Network