XLOC_022642


Basic Information

Item Value
gene id XLOC_022642
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 43883869 ~ 43884804 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044759
tgacaatatgtgtttaattaagctataaagatcagatgaaatgcatagtgaaatatgaaataaatgtctcttttgctgaaaatttaattaatctatatatttattattttaaaaatcaactcatttttgcccagagaaagaggcgcgcggcactagcggacatggggtgcttttccaaaaaaagacgtacagtaacttgcagctgaactatgcacagtaatagggatacaatgaaaagccgattttcactattgaccctgtttttattcattgacggcttcccaacgccgcttttctgttgcgcgaaaaaaagctgctgcaaataagcaaatttatgacaaaacaattttaatagtttcatagtagtagctggtgtgcttcatctgcgtgattctgatttgacattcttccgctaaacttgcactgTGTTGATGTGTAAATGGACTATGTGTTGATGTGTTAATGGGCTATGATCTTTGCTATTgagttctctttgcaactttcaatttcgaggtgggggaagtgggaagaggcaattcaaatgtaccatctctaaaaaaaaggccgcttacgcggcatttgtgtttattattaccttatttttattttattattattaatttattcattcattcttcattcattttcttttcggtttag

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0098813 nuclear chromosome segregation biological_process
GO:0090307 mitotic spindle assembly biological_process
GO:0051225 spindle assembly biological_process
GO:0048285 organelle fission biological_process
GO:0007049 cell cycle biological_process
GO:0007052 mitotic spindle organization biological_process
GO:0007059 chromosome segregation biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:0000280 nuclear division biological_process
GO:0072686 mitotic spindle cellular_component
GO:0005813 centrosome cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0005634 nucleus cellular_component
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko03050 Proteasome
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044759 True 660 lncRNA 0.35 2 43883869 43884804

Neighbor

gene id symbol gene type direction distance location
XLOC_022641 abce1 coding downstream 165802 43695036 ~ 43718067 (-)
XLOC_022640 NA coding downstream 215026 43665412 ~ 43668843 (-)
XLOC_022639 CABZ01117603.1 coding downstream 274274 43597961 ~ 43609595 (-)
XLOC_022638 itchb coding downstream 287913 43535224 ~ 43595956 (-)
XLOC_022637 CABZ01117597.1 coding downstream 353154 43530601 ~ 43530715 (-)
XLOC_022643 NA coding upstream 43694 43928498 ~ 43930231 (-)
XLOC_022644 NA coding upstream 104435 43989239 ~ 43992522 (-)
XLOC_022645 CABZ01071875.1 coding upstream 125621 44010425 ~ 44010541 (-)
XLOC_022646 CABZ01071874.1 coding upstream 128878 44013682 ~ 44017082 (-)
XLOC_022647 zgc:158659 coding upstream 306048 44190852 ~ 44233410 (-)
XLOC_022632 CR545469.1 non-coding downstream 594418 43244091 ~ 43289451 (-)
XLOC_022631 BX004770.1 non-coding downstream 757923 43021194 ~ 43125946 (-)
XLOC_022630 CABZ01066224.1 non-coding downstream 977341 42884603 ~ 42906528 (-)
XLOC_022650 NA non-coding upstream 630395 44515199 ~ 44521974 (-)

Expression


Co-expression Network