G336777


Basic Information

Item Value
gene id G336777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 27451518 ~ 27454337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU381286
aggtaggctagttgagaacaagttctcatttacaactgtatcctgaccaagataaagcaaagcagtgcgacaaaaacaacagcacagagttacacataaacaaacgtacagtcagtaacacaatagaaaaatctatgtacagtgtgtgcaaatgtggaagattagggaggtaaggcaataaataggccatagtggcaaaataattacaatttagcattaacactagagtgatagatgtgcagatggtgatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU381286 True 253 lncRNA 0.38 2 27451518 27454337

Neighbor

gene id symbol gene type direction distance location
tcp1 tcp1 coding upstream 256167 27186465 ~ 27195351 (+)
LOC110522355 plekhg1 coding upstream 266069 27054628 ~ 27185449 (+)
LOC110522356 ostm1 coding upstream 446899 26998492 ~ 27004619 (+)
snx3 snx3 coding upstream 489670 26935835 ~ 26961848 (+)
sesn1 sesn1 coding upstream 694974 26686142 ~ 26756544 (+)
LOC118964415 LOC106608050 coding downstream 82925 27537262 ~ 27601564 (+)
opn8b LOC106608041 coding downstream 170363 27624700 ~ 27664419 (+)
LOC110522435 wdcp coding downstream 303096 27757433 ~ 27764552 (+)
LOC110522440 atad2b coding downstream 346586 27800923 ~ 27962367 (+)
LOC118964460 NA coding downstream 416806 27871143 ~ 27872978 (+)
G336742 NA non-coding upstream 14467 27395375 ~ 27437051 (+)
G336723 NA non-coding upstream 80464 27327879 ~ 27371054 (+)
G336724 NA non-coding upstream 110519 27334124 ~ 27340999 (+)
G336727 NA non-coding upstream 111507 27336318 ~ 27340011 (+)
G336725 NA non-coding upstream 115298 27334664 ~ 27336220 (+)
G338328 NA non-coding downstream 147394 27601731 ~ 27602437 (+)
G338358 NA non-coding downstream 169038 27623375 ~ 27623670 (+)
G338363 NA non-coding downstream 171206 27625543 ~ 27625857 (+)
G338379 NA non-coding downstream 186148 27640485 ~ 27640826 (+)
G338383 NA non-coding downstream 193710 27648047 ~ 27648268 (+)
G336464 NA other upstream 556681 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 1393827 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 3028787 24420114 ~ 24422731 (+)
G334475 NA other upstream 3032572 24417582 ~ 24418946 (+)
G339660 NA other downstream 1404379 28858716 ~ 28859155 (+)
G339693 NA other downstream 1460262 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 1712181 29166518 ~ 29166996 (+)
G339928 NA other downstream 1881032 29335369 ~ 29336939 (+)

Expression


Co-expression Network