G340011


Basic Information

Item Value
gene id G340011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29498147 ~ 29498534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384848
gctacaggaaaggaagacccagagttacctctgctgtggtatgatgaaactggctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctgtggtatgatgaaactggctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctgcagaggatacgtttattaAAGTGAACTGCACCtgggattgcagcccaaataaattattcaaagagttcaagtaacagacacatcttagcatcaactgttcagaggagaccacgtgaatcaggccttcatggtccaattgctgcaaagaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384848 True 321 lncRNA 0.47 2 29498147 29498534

Neighbor

gene id symbol gene type direction distance location
LOC110522453 LOC106608073 coding upstream 19941 29463955 ~ 29478206 (+)
LOC110522452 LOC106608075 coding upstream 36765 29422294 ~ 29461382 (+)
LOC110522451 LOC106608077 coding upstream 149983 29339536 ~ 29348164 (+)
LOC118964461 NA coding upstream 312110 29182879 ~ 29186037 (+)
LOC118964462 NA coding upstream 321253 29174963 ~ 29176894 (+)
LOC110522456 LOC106608096 coding downstream 135142 29633676 ~ 29641117 (+)
LOC110522458 mmsa coding downstream 187498 29686032 ~ 29706801 (+)
LOC110522461 LOC106608092 coding downstream 219244 29717778 ~ 29727201 (+)
LOC110522463 LOC106608087 coding downstream 289034 29787568 ~ 29798140 (+)
LOC110522467 LOC106608085 coding downstream 339835 29838369 ~ 29842910 (+)
G339859 NA non-coding upstream 134988 29330943 ~ 29363159 (+)
G339862 NA non-coding upstream 136120 29329904 ~ 29362027 (+)
G339937 NA non-coding upstream 141449 29355831 ~ 29356698 (+)
G339938 NA non-coding upstream 141485 29356197 ~ 29356662 (+)
G340081 NA non-coding downstream 148928 29647462 ~ 29647784 (+)
G340106 LOC106608094 non-coding downstream 185286 29683820 ~ 29684213 (+)
G340107 NA non-coding downstream 186818 29685352 ~ 29685606 (+)
G340125 LOC106608091 non-coding downstream 239459 29737993 ~ 29738401 (+)
G340153 NA non-coding downstream 271272 29769806 ~ 29770443 (+)
G339928 NA other upstream 161208 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 331151 29166518 ~ 29166996 (+)
G339693 NA other upstream 582608 28914599 ~ 28915539 (+)
G339660 NA other upstream 638992 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 1896591 27537262 ~ 27601564 (+)
G342538 NA other downstream 1883292 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1919421 31417955 ~ 31422086 (+)
G342571 NA other downstream 1952599 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 2287331 31785865 ~ 31786206 (+)
G343958 NA other downstream 3196452 32694986 ~ 32704371 (+)

Expression


Co-expression Network