G340224


Basic Information

Item Value
gene id G340224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29895792 ~ 29896176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU385083
gctgtCGTGTGGTGTGTTGAGGATGTGAACAGTGCTGGGTTTGACTCCGTTGGCCTTGGTCCTCCGGTACAGAGCGAAGcggctcttcctcctccccctgtccccaCTGGGCAGAGAACCATTGTACCTACAGAGAACACAAAAACAAGTACACAGAGAGGCTACATAATTAGCGAAAGGGAATACCGCATGTATCCCATTCACCTCATGTGATCATTGAAGACAGTTGATATCGCAAATCAATACTGATCATTAGGCTCTTTTGTTTTGGCAGTTGGATGCCTGTAGGCATACTTTGCCACATAATTAAATATCCCTTTTATTATGCTAGCCTATCACACCCACCACTCATTCCTCACAGACAACTAATGTATTGTACAACTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU385083 True 385 lncRNA 0.46 1 29895792 29896176

Neighbor

gene id symbol gene type direction distance location
LOC110522467 LOC106608085 coding upstream 52882 29838369 ~ 29842910 (+)
LOC110522463 LOC106608087 coding upstream 97652 29787568 ~ 29798140 (+)
LOC110522461 LOC106608092 coding upstream 168591 29717778 ~ 29727201 (+)
LOC110522458 mmsa coding upstream 188991 29686032 ~ 29706801 (+)
LOC110522456 LOC106608096 coding upstream 254675 29633676 ~ 29641117 (+)
LOC110522470 prpf39 coding downstream 46000 29942176 ~ 29952127 (+)
LOC110522472 rs30 coding downstream 56285 29952461 ~ 29957558 (+)
LOC110522479 NA coding downstream 900043 30796219 ~ 30797687 (+)
LOC110522477 mgat2 coding downstream 920240 30816416 ~ 30823059 (+)
LOC110522488 hs90a coding downstream 1273475 31169651 ~ 31182712 (+)
G340225 NA non-coding upstream 1379 29893748 ~ 29894413 (+)
G340201 LOC107574485 non-coding upstream 5273 29859098 ~ 29890519 (+)
G340219 LOC106608084 non-coding upstream 8024 29883803 ~ 29887768 (+)
G340193 NA non-coding upstream 44243 29851240 ~ 29851549 (+)
G340182 NA non-coding upstream 69243 29826271 ~ 29826549 (+)
G340223 NA non-coding downstream 1949 29898125 ~ 29898444 (+)
G340227 NA non-coding downstream 7415 29903591 ~ 29907479 (+)
G340226 NA non-coding downstream 14462 29910638 ~ 29914232 (+)
G340238 NA non-coding downstream 31152 29927328 ~ 29927607 (+)
G340240 NA non-coding downstream 33019 29929195 ~ 29929455 (+)
G339928 NA other upstream 558853 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 728796 29166518 ~ 29166996 (+)
G339693 NA other upstream 980253 28914599 ~ 28915539 (+)
G339660 NA other upstream 1036637 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 2294236 27537262 ~ 27601564 (+)
G342538 NA other downstream 1485650 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1521779 31417955 ~ 31422086 (+)
G342571 NA other downstream 1554957 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 1889689 31785865 ~ 31786206 (+)
G343958 NA other downstream 2798810 32694986 ~ 32704371 (+)

Expression


Co-expression Network