G340243


Basic Information

Item Value
gene id G340243
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29932476 ~ 29932695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU385108
gggagacccatggtgcggcgcacaattggcctagcgtcatccgggttaggggagggtttggccggcaggtatgtccttgtcccatcgcacactagtgactcctgtggtgggccaggcgcagtgcacactgacacggttgcCATGTagactgtgtttcctccgacacattgatgaGGCTGGCTTTCAGGTTAAGTgggaattgtgtcaagaagcagtgcgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU385108 True 220 lncRNA 0.58 1 29932476 29932695

Neighbor

gene id symbol gene type direction distance location
LOC110522467 LOC106608085 coding upstream 89566 29838369 ~ 29842910 (+)
LOC110522463 LOC106608087 coding upstream 134336 29787568 ~ 29798140 (+)
LOC110522461 LOC106608092 coding upstream 205275 29717778 ~ 29727201 (+)
LOC110522458 mmsa coding upstream 225675 29686032 ~ 29706801 (+)
LOC110522456 LOC106608096 coding upstream 291359 29633676 ~ 29641117 (+)
LOC110522470 prpf39 coding downstream 9481 29942176 ~ 29952127 (+)
LOC110522472 rs30 coding downstream 19766 29952461 ~ 29957558 (+)
LOC110522479 NA coding downstream 863524 30796219 ~ 30797687 (+)
LOC110522477 mgat2 coding downstream 883721 30816416 ~ 30823059 (+)
LOC110522488 hs90a coding downstream 1236956 31169651 ~ 31182712 (+)
G340242 NA non-coding upstream 173 29931825 ~ 29932303 (+)
G340240 NA non-coding upstream 3021 29929195 ~ 29929455 (+)
G340238 NA non-coding upstream 4869 29927328 ~ 29927607 (+)
G340226 NA non-coding upstream 18244 29910638 ~ 29914232 (+)
G340227 NA non-coding upstream 24997 29903591 ~ 29907479 (+)
G340244 NA non-coding downstream 463 29933158 ~ 29933395 (+)
G340245 NA non-coding downstream 926 29933621 ~ 29933874 (+)
G340247 NA non-coding downstream 7133 29939828 ~ 29940116 (+)
G340258 NA non-coding downstream 39467 29972162 ~ 29972386 (+)
G340259 NA non-coding downstream 40652 29973347 ~ 29974350 (+)
G339928 NA other upstream 595537 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 765480 29166518 ~ 29166996 (+)
G339693 NA other upstream 1016937 28914599 ~ 28915539 (+)
G339660 NA other upstream 1073321 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 2330920 27537262 ~ 27601564 (+)
G342538 NA other downstream 1449131 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1485260 31417955 ~ 31422086 (+)
G342571 NA other downstream 1518438 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 1853170 31785865 ~ 31786206 (+)
G343958 NA other downstream 2762291 32694986 ~ 32704371 (+)

Expression


Co-expression Network