G340258


Basic Information

Item Value
gene id G340258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29972162 ~ 29972386 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU385123
cctgtttcagcacaaagcaagattggtgtggaagaacttgactggcctgcacagagtcctgacctcaaccccatcgaacacctttgggatgaattggaatgccgactgtgcGCCAGGCGTAATCGCGCAACATCAGGACCCGACCTCACTATTTCTCTTGTGGCTGAAAAGGAAACAAGTCCccgcatctagtggaaagccttcccagaagagtggaggctgtta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU385123 True 225 lncRNA 0.52 1 29972162 29972386

Neighbor

gene id symbol gene type direction distance location
LOC110522472 rs30 coding upstream 14604 29952461 ~ 29957558 (+)
LOC110522470 prpf39 coding upstream 20035 29942176 ~ 29952127 (+)
LOC110522467 LOC106608085 coding upstream 129252 29838369 ~ 29842910 (+)
LOC110522463 LOC106608087 coding upstream 174022 29787568 ~ 29798140 (+)
LOC110522461 LOC106608092 coding upstream 244961 29717778 ~ 29727201 (+)
LOC110522479 NA coding downstream 823833 30796219 ~ 30797687 (+)
LOC110522477 mgat2 coding downstream 844030 30816416 ~ 30823059 (+)
LOC110522488 hs90a coding downstream 1197265 31169651 ~ 31182712 (+)
ppp2r5cb LOC106608134 coding downstream 1214840 31187226 ~ 31227364 (+)
slc25a29 LOC106608124 coding downstream 1419793 31392179 ~ 31401929 (+)
G340247 NA non-coding upstream 32046 29939828 ~ 29940116 (+)
G340245 NA non-coding upstream 38288 29933621 ~ 29933874 (+)
G340244 NA non-coding upstream 38767 29933158 ~ 29933395 (+)
G340243 NA non-coding upstream 39467 29932476 ~ 29932695 (+)
G340242 NA non-coding upstream 39859 29931825 ~ 29932303 (+)
G340259 NA non-coding downstream 961 29973347 ~ 29974350 (+)
G340260 NA non-coding downstream 2756 29975142 ~ 29975459 (+)
G340263 NA non-coding downstream 5689 29978075 ~ 29978330 (+)
G340267 NA non-coding downstream 16009 29988395 ~ 29989043 (+)
G340279 LOC106608098 non-coding downstream 33540 30005926 ~ 30006499 (+)
G339928 NA other upstream 635223 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 805166 29166518 ~ 29166996 (+)
G339693 NA other upstream 1056623 28914599 ~ 28915539 (+)
G339660 NA other upstream 1113007 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 2370606 27537262 ~ 27601564 (+)
G342538 NA other downstream 1409440 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1445569 31417955 ~ 31422086 (+)
G342571 NA other downstream 1478747 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 1813479 31785865 ~ 31786206 (+)
G343958 NA other downstream 2722600 32694986 ~ 32704371 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location