Gene
RNA
| Item | Value |
|---|---|
| gene id | G341878 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 30751084 ~ 30751746 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU386883 | True | 663 | lncRNA | 0.39 | 1 | 30751084 | 30751746 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522472 | rs30 | coding | upstream | 793526 | 29952461 ~ 29957558 (+) |
| LOC110522470 | prpf39 | coding | upstream | 798957 | 29942176 ~ 29952127 (+) |
| LOC110522467 | LOC106608085 | coding | upstream | 908174 | 29838369 ~ 29842910 (+) |
| LOC110522463 | LOC106608087 | coding | upstream | 952944 | 29787568 ~ 29798140 (+) |
| LOC110522461 | LOC106608092 | coding | upstream | 1023883 | 29717778 ~ 29727201 (+) |
| LOC110522479 | NA | coding | downstream | 44473 | 30796219 ~ 30797687 (+) |
| LOC110522477 | mgat2 | coding | downstream | 64670 | 30816416 ~ 30823059 (+) |
| LOC110522488 | hs90a | coding | downstream | 417905 | 31169651 ~ 31182712 (+) |
| ppp2r5cb | LOC106608134 | coding | downstream | 435480 | 31187226 ~ 31227364 (+) |
| slc25a29 | LOC106608124 | coding | downstream | 640433 | 31392179 ~ 31401929 (+) |
| G341781 | NA | non-coding | upstream | 4769 | 30724762 ~ 30746315 (+) |
| G341339 | NA | non-coding | upstream | 266567 | 30482577 ~ 30484517 (+) |
| G341235 | NA | non-coding | upstream | 428834 | 30322043 ~ 30322250 (+) |
| G341234 | LOC106608081 | non-coding | upstream | 431813 | 30319000 ~ 30319271 (+) |
| G341223 | NA | non-coding | upstream | 447078 | 30303794 ~ 30304006 (+) |
| G341880 | NA | non-coding | downstream | 1572 | 30753318 ~ 30754204 (+) |
| G341912 | NA | non-coding | downstream | 48549 | 30800295 ~ 30802694 (+) |
| G341914 | NA | non-coding | downstream | 53647 | 30805393 ~ 30805615 (+) |
| G341909 | NA | non-coding | downstream | 61852 | 30813598 ~ 30814599 (+) |
| G341921 | NA | non-coding | downstream | 73807 | 30825553 ~ 30826284 (+) |
| G339928 | NA | other | upstream | 1414145 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 1584088 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 1835545 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 1891929 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 3149528 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 630080 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 666209 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 699387 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 1034119 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 1943240 | 32694986 ~ 32704371 (+) |
