Gene
RNA
| Item | Value |
|---|---|
| gene id | G342077 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 31139317 ~ 31139564 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU387103 | True | 248 | lncRNA | 0.39 | 1 | 31139317 | 31139564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522477 | mgat2 | coding | upstream | 316258 | 30816416 ~ 30823059 (+) |
| LOC110522479 | NA | coding | upstream | 341630 | 30796219 ~ 30797687 (+) |
| LOC110522472 | rs30 | coding | upstream | 1181759 | 29952461 ~ 29957558 (+) |
| LOC110522470 | prpf39 | coding | upstream | 1187190 | 29942176 ~ 29952127 (+) |
| LOC110522467 | LOC106608085 | coding | upstream | 1296407 | 29838369 ~ 29842910 (+) |
| LOC110522488 | hs90a | coding | downstream | 30087 | 31169651 ~ 31182712 (+) |
| ppp2r5cb | LOC106608134 | coding | downstream | 47662 | 31187226 ~ 31227364 (+) |
| slc25a29 | LOC106608124 | coding | downstream | 252615 | 31392179 ~ 31401929 (+) |
| LOC110522495 | NA | coding | downstream | 269724 | 31408651 ~ 31412134 (+) |
| LOC110522493 | LOC106608104 | coding | downstream | 278902 | 31417955 ~ 31422086 (+) |
| G342076 | NA | non-coding | upstream | 325 | 31138789 ~ 31138992 (+) |
| G342072 | NA | non-coding | upstream | 4719 | 31134392 ~ 31134598 (+) |
| G341985 | NA | non-coding | upstream | 31545 | 30956085 ~ 31107772 (+) |
| G342050 | NA | non-coding | upstream | 42890 | 31095688 ~ 31096427 (+) |
| G341983 | LOC106608127 | non-coding | upstream | 126623 | 30954756 ~ 31012694 (+) |
| G342082 | NA | non-coding | downstream | 5978 | 31145542 ~ 31145903 (+) |
| G342083 | NA | non-coding | downstream | 7213 | 31146777 ~ 31147018 (+) |
| G342084 | NA | non-coding | downstream | 7829 | 31147393 ~ 31147679 (+) |
| G342099 | NA | non-coding | downstream | 59042 | 31198606 ~ 31199374 (+) |
| G342448 | NA | non-coding | downstream | 158251 | 31297815 ~ 31298040 (+) |
| G339928 | NA | other | upstream | 1802378 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 1972321 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 2223778 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 2280162 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 3537761 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 242262 | 31381826 ~ 31382749 (+) |
| G342571 | NA | other | downstream | 311569 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 646301 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 1555422 | 32694986 ~ 32704371 (+) |
