Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522858 |
| gene name | LOC106563124 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 26385129 ~ 26386670 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:1902476 | chloride transmembrane transport | biological_process |
| GO:0044070 | regulation of anion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005247 | voltage-gated chloride channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110522858 | True | 666 | mRNA | 0.54 | 5 | 26385129 | 26386670 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523509 | LOC106567323 | coding | upstream | 15328 | 26365281 ~ 26369801 (+) |
| LOC110523508 | LOC106567317 | coding | upstream | 33181 | 26313498 ~ 26351948 (+) |
| LOC110523505 | LOC106567281 | coding | upstream | 75458 | 26285207 ~ 26309671 (+) |
| LOC110523506 | LOC106567292 | coding | upstream | 108516 | 26237304 ~ 26276613 (+) |
| LOC110523503 | NA | coding | upstream | 198419 | 26174884 ~ 26186710 (+) |
| pnpla7a | NA | coding | downstream | 7168 | 26393838 ~ 26397453 (+) |
| LOC110522865 | LOC106567246 | coding | downstream | 50847 | 26437517 ~ 26502284 (+) |
| pus1 | pus1 | coding | downstream | 467401 | 26854071 ~ 26877217 (+) |
| noc4l | noc4l | coding | downstream | 490846 | 26877516 ~ 26884592 (+) |
| LOC110523521 | vps29 | coding | downstream | 498217 | 26884887 ~ 26887645 (+) |
| G382925 | NA | non-coding | upstream | 185255 | 26191034 ~ 26199874 (+) |
| G382815 | NA | non-coding | upstream | 216981 | 26167202 ~ 26168148 (+) |
| G382811 | NA | non-coding | upstream | 231671 | 26152625 ~ 26153458 (+) |
| G382795 | NA | non-coding | upstream | 404501 | 25980401 ~ 25980628 (+) |
| G382689 | NA | non-coding | upstream | 569566 | 25806737 ~ 25815563 (+) |
| G383082 | NA | non-coding | downstream | 89446 | 26476116 ~ 26482496 (+) |
| G383723 | NA | non-coding | downstream | 131528 | 26518198 ~ 26520171 (+) |
| G383750 | NA | non-coding | downstream | 163786 | 26550456 ~ 26579192 (+) |
| G383755 | NA | non-coding | downstream | 193577 | 26580247 ~ 26580534 (+) |
| G383758 | NA | non-coding | downstream | 197899 | 26584569 ~ 26584974 (+) |
| G382186 | NA | other | upstream | 1159399 | 25225442 ~ 25225730 (+) |
| G381239 | NA | other | upstream | 1608700 | 24687739 ~ 24776429 (+) |
| LOC110523468 | vamp5 | other | upstream | 2540784 | 23838502 ~ 23844345 (+) |
| G380340 | NA | other | upstream | 2643670 | 23740434 ~ 23741459 (+) |
| G383794 | LOC106566282 | other | downstream | 275168 | 26661838 ~ 26663613 (+) |
| LOC110522888 | LOC106566402 | other | downstream | 1288682 | 27675352 ~ 27719165 (+) |
| G385053 | NA | other | downstream | 1320044 | 27706714 ~ 27707078 (+) |
| G385171 | LOC106566130 | other | downstream | 1517797 | 27904467 ~ 27904731 (+) |
