rgs7bpb (LOC106566593)


Basic Information

Item Value
gene id rgs7bpb
gene name LOC106566593
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28418222 ~ 28423947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977205.1
cagtgttaagatttcccttcactggaactaagttgcctagcccaaaccatgaaaaacagccccagaccattattgcttcaccaaactttacagttggcactattcattggggcgttctcctggcatctgccaaacccagatttgtcagaGGGACTGCCAGTAAAGTGTGATTCATTACTCCGgagaacgagtttccactgctccagagtccaatgatggagagctttacaccactccagccaacgattagcattgcacatggtgatcttaggcttgtgtgcagctgctcagccatTGAAACACATTTCTTGAACAGTTCTTCTGCTggagttgcttccagaggcagtttggaactgggtTGTGAGTGAACAGAACAGATTATTTTTACGCACTACAcgtttcagcactcggcggtcccgttctgtgagcttctgtggcctaccacttcacggctgtttccacttcacattaacagcacttgaccggggcagctctagctttgaagaaatttgacaaaattacttgttggaaaggtggcattgcTATGAGGTACTACATTGAAAGACACTGAGCTCTTCTgtaaggccattctgctgccgatgtttgtctatggagattttaTACATCaaatttatacacctgtcagcaacaggtgtgtgcgatatagccgaatccactgatttgaaagggtgtccacatacttttgtatatatagtgtattttagTACTGTTGCAATTTTGTGTGTTGCAGGGACTCAttgtaatattttgtcttaccAGTGTGTCATTCAGTGTATTACCAATGATAGACATCTTTTATACATTTTACAGAACAAATTGCCAAATCTCTGACCCGCTTGCTTTGGAGTCGTCGACGCCTCAACAGTTAACGGGATGCCGGAGCAGTGACAAATGGTTGGCTCAGGCTCCCCATGAATTCGCTTCTCAGGTGAAAGCACGACAGAAGACCGTTCAGCCGCAGTTGGCCTTCTGCTGGGGTGAAGGTGACTCGTTTCGCCGCTgaggagagagatgcagagaagaaGCTGCGAGCCGTCCACTACTTGCTGTCGTCCTGCAAGCTGAACATACGAATATTATAGATAGGCTGGCCGTGGGATTTTATCAGTGACTGTGTATGCATGTGTTCTGCACCGAACGGGCGCATTAACCGCCCCAGATCCGCAGCGAACATTTTCCAGCTCGGCAAACCACCGCAGAGGGACCCCGAGCGCCGGGAGAGCACCGAGAGCGCGCGGAAAGCCCAGCGGGCCGTAGGCGACTGTAGGATGACTGTCCAAGAATTCAACACTCTTGTGGCGCTGTACCGAGAACAGGTCATCTCTATTGGGGAGATTTCTGCCGATTGTCCCTCTTTACGGGCCGTGCTGCACCGTACCAGGACCAAAGGATGCGCTATGGCCCAAGCTGCCCATCAGAACCTCACCGTGATATCTGGGTCTGGGCCAGAGGATGGGGAGATCCACCCAGAGATCTGCCGGCTCTTCATCCAGCTGCAGTGCTGCCTGGAGATGTTCATCACGGAGATGCTCAAGTCCATGTGTCTATTGGGGGTACTGCAGCTCCACAGGAAAGGAAAGGATTCATACCCGGAGCCCAGGCTGGACTTCAAGATGGATGAGAGTTCTGATGTACCCATCCTGGAGGAGCGCTCCTCCTCACCTGTGGACTACCAACATGAGTCCTGGCTGGTGTGCACCGATATTGAAAACATAGAGAGGGACATGCGAGAGATGAGAAACCTACTCAGCAAACTCAGGGAGACCATGCCTTTACCACTAAAAAACCAAGATGACAGCAGTCTGCTGAATCTCACTCAATACCCGCTAGTCAGGCAGAGGAAGAGGCGCTTCTCTGGGTTCTGCTGCCTGGTGTCTGGCTGAGTCAGTCGGGTCCTGCAGGCAGCAGCAAGGGCAGCACACCAACCCTACACAACACCTTACATGTTATTACTGCCATTTGGGGAAGGAACTTTCTGATCAGTCTGTCTTTATTTTGTAATATGATTATATGTAGAAAAAGCTATTCAAATATAATGTTACAAACATGCATATTTTGCTATTATATTATTCAAGCTGTCTCTCTTTGTAGAAAAGGAGGACCCTTAGGTCTATAGACGAGCACAAACGGATGTGCCAAACTGATGCCATGAGAGATGCATTATGTTGGTAGACAGCTTTGCCTAATCTTTGCCTTCAGACATCTTCCTCAGAATGTCATTATATTTCTTCACTGTGCGATGCTTCTTTTGCAGTCTTCCATGAAAAGGAAATCTGTCTCCAACTTACTTTTTCCATCACAAGGGCTTTGCAATGCTCCATATCAAAAACATTTCTCATTTcatgtaaatacagtatataaatggTGGTAAATGTTTTGTATGAAACTTTCTTTGAATAATGTAACTATAGATTATCTAAAGATTGAATGTCTAAATCGTTTGCATTGATTTATTTTGATGTCTTGGCCGAAAGTGTACAGCATGAATATTGCTATTTGTACTGTGGTAGATGTGTAGTGTATAGATGTTGTGCTATAGATTGTTGTACGGCTGACAGTATGTATAGGCCATTTTATAATGTGAATAAACTTTTTGTATTTAAATAA
>XM_021602336.2
gtgttaagatttcccttcactggaactaagttgcctagcccaaaccatgaaaaacagccccagaccattattgcttcaccaaactttacagttggcactattcattggggcgttctcctggcatctgccaaacccagatttgtcagaGGGACTGCCAGTAAAGTGTGATTCATTACTCCGgagaacgagtttccactgctccagagtccaatgatggagagctttacaccactccagccaacgattagcattgcacatggtgatcttaggcttgtgtgcagctgctcagccatTGAAACACATTTCTTGAACAGTTCTTCTGCTggagttgcttccagaggcagtttggaactgggtTGTGAGTGAACAGAACAGATTATTTTTACGCACTACAcgtttcagcactcggcggtcccgttctgtgagcttctgtggcctaccacttcacggctgtttccacttcacattaacagcacttgaccggggcagctctagctttgaagaaatttgacaaaattacttgttggaaaggtggcattgcTATGAGGTACTACATTGAAAGACACTGAGCTCTTCTgtaaggccattctgctgccgatgtttgtctatggagattttaTACATCaaatttatacacctgtcagcaacaggtgtgtgcgatatagccgaatccactgatttgaaagggtgtccacatacttttgtatatatagtgtattttagTACTGTTGCAATTTTGTGTGTTGCAGGGACTCAttgtaatattttgtcttaccAGTGTGTCATTCAGTGTATTACCAATGATAGACATCTTTTATACATTTTACAGAACAAATTGCCAAATCTCTGGTAAGTTATGTGTCAAATGTACAGTTTTCATTGGTTGGCAATTGTGGTGACAATAATACATTGGTTTGCTTGCAGCCAACAGTAGCCTGTATGTCTGTATTCTGTATCTCACATCGGTCGGGGAGGCTGTGATGTGCGTAAATTGATGAGATTTACTTTGAGCATTCATATTCCTGCTGGTCTTTGAATGTGCTGTTGCTCATACCAGATACGAATCATATTTGTAGATATTTGCGTTTATTCTCAATACTTTCCTGCGACAGACCCGCTTGCTTTGGAGTCGTCGACGCCTCAACAGTTAACGGGATGCCGGAGCAGTGACAAATGGTTGGCTCAGGCTCCCCATGAATTCGCTTCTCAGGTGAAAGCACGACAGAAGACCGTTCAGCCGCAGTTGGCCTTCTGCTGGGGTGAAGGTGACTCGTTTCGCCGCTgaggagagagatgcagagaagaaGCTGCGAGCCGTCCACTACTTGCTGTCGTCCTGCAAGCTGAACATACGAATATTATAGATAGGCTGGCCGTGGGATTTTATCAGTGACTGTGTATGCATGTGTTCTGCACCGAACGGGCGCATTAACCGCCCCAGATCCGCAGCGAACATTTTCCAGCTCGGCAAACCACCGCAGAGGGACCCCGAGCGCCGGGAGAGCACCGAGAGCGCGCGGAAAGCCCAGCGGGCCGTAGGCGACTGTAGGATGGTCATCTCTATTGGGGAGATTTCTGCCGATTGTCCCTCTTTACGGGCCGTGCTGCACCGTACCAGGACCAAAGGATGCGCTATGGCCCAAGCTGCCCATCAGAACCTCACCGTGATATCTGGGTCTGGGCCAGAGGATGGGGAGATCCACCCAGAGATCTGCCGGCTCTTCATCCAGCTGCAGTGCTGCCTGGAGATGTTCATCACGGAGATGCTCAAGTCCATGTGTCTATTGGGGGTACTGCAGCTCCACAGGAAAGGAAAGGATTCATACCCGGAGCCCAGGCTGGACTTCAAGATGGATGAGAGTTCTGATGTACCCATCCTGGAGGAGCGCTCCTCCTCACCTGTGGACTACCAACATGAGTCCTGGCTGGTGTGCACCGATATTGAAAACATAGAGAGGGACATGCGAGAGATGAGAAACCTACTCAGCAAACTCAGGGAGACCATGCCTTTACCACTAAAAAACCAAGATGACAGCAGTCTGCTGAATCTCACTCAATACCCGCTAGTCAGGCAGAGGAAGAGGCGCTTCTCTGGGTTCTGCTGCCTGGTGTCTGGCTGAGTCAGTCGGGTCCTGCAGGCAGCAGCAAGGGCAGCACACCAACCCTACACAACACCTTACATGTTATTACTGCCATTTGGGGAAGGAACTTTCTGATCAGTCTGTCTTTATTTTGTAATATGATTATATGTAGAAAAAGCTATTCAAATATAATGTTACAAACATGCATATTTTGCTATTATATTATTCAAGCTGTCTCTCTTTGTAGAAAAGGAGGACCCTTAGGTCTATAGACGAGCACAAACGGATGTGCCAAACTGATGCCATGAGAGATGCATTATGTTGGTAGACAGCTTTGCCTAATCTTTGCCTTCAGACATCTTCCTCAGAATGTCATTATATTTCTTCACTGTGCGATGCTTCTTTTGCAGTCTTCCATGAAAAGGAAATCTGTCTCCAACTTACTTTTTCCATCACAAGGGCTTTGCAATGCTCCATATCAAAAACATTTCTCATTTcatgtaaatacagtatataaatggTGGTAAATGTTTTGTATGAAACTTTCTTTGAATAATGTAACTATAGATTATCTAAAGATTGAATGTCTAAATCGTTTGCATTGATTTATTTTGATGTCTTGGCCGAAAGTGTACAGCATGAATATTGCTATTTGTACTGTGGTAGATGTGTAGTGTATAGATGTTGTGCTATAGATTGTTGTACGGCTGACAGTATGTATAGGCCATTTTATAATGTGAATAAACTTTTTGTATTTAAATAA

Function

NR:

description
regulator of G-protein signaling 7-binding protein B-like isoform X2

GO:

id name namespace
GO:0009968 negative regulation of signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977205.1 False 2628 mRNA 0.46 7 28418222 28423947
XM_021602336.2 True 2844 mRNA 0.45 6 28418224 28423947

Neighbor

gene id symbol gene type direction distance location
rnf180 LOC106566588 coding upstream 1814 28406724 ~ 28416408 (+)
ank1b LOC106566514 coding upstream 71304 28269837 ~ 28346918 (+)
LOC118964582 NA coding upstream 115114 28297723 ~ 28303108 (+)
LOC118964581 NA coding upstream 153887 28261777 ~ 28264335 (+)
LOC110518653 LOC106566474 coding upstream 156646 28257967 ~ 28261576 (+)
ghr1 ghr1 coding downstream 15131 28439078 ~ 28463949 (+)
LOC110523547 ccdc152 coding downstream 40152 28464099 ~ 28467134 (+)
LOC110522905 LOC106563371 coding downstream 49600 28473547 ~ 28475595 (+)
LOC110523549 LOC106567216 coding downstream 57485 28481432 ~ 28483385 (+)
pip5k1ba LOC106566653 coding downstream 296330 28720277 ~ 28733042 (+)
G385868 NA non-coding upstream 21476 28396537 ~ 28396746 (+)
G385864 NA non-coding upstream 29289 28388727 ~ 28388933 (+)
G385857 NA non-coding upstream 36333 28381657 ~ 28381889 (+)
G385856 NA non-coding upstream 37242 28380757 ~ 28380980 (+)
G385848 NA non-coding upstream 50328 28366757 ~ 28367894 (+)
G385884 NA non-coding downstream 356 28424303 ~ 28424517 (+)
G385886 NA non-coding downstream 573 28424520 ~ 28424894 (+)
G385885 NA non-coding downstream 6734 28430681 ~ 28432375 (+)
G385891 NA non-coding downstream 48122 28472069 ~ 28472287 (+)
G385805 NA other upstream 667 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 513491 27904467 ~ 27904731 (+)
G385053 NA other upstream 711144 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 734829 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1754609 26661838 ~ 26663613 (+)
spag8 LOC106566715 other downstream 502330 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1317853 29741800 ~ 29763439 (+)
G387516 NA other downstream 1473039 29896986 ~ 29898134 (+)
G388019 NA other downstream 1863004 30286951 ~ 30287824 (+)
G390184 NA other downstream 3536408 31960355 ~ 31960745 (+)

Expression


Co-expression Network