kcnn2 (LOC106564970)


Basic Information

Item Value
gene id kcnn2
gene name LOC106564970
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35930114 ~ 35960310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601250.2
TATCTCGGTGTTCATACTTGAACAGTCTCACTTGTAAGACATTGTTTTTCTCTACTGACATGCTACTTTCCTTGAATGAATATTCGAAAAAATGTTGCAACCTTTTCAATGACGTCAAGACGGTTGTTTTGGTCCTGTCTATCCAATTGGAGCCATCACTTACATTCTACAGGAGCCGAAATGGGTCTAATCTTGCTCCGTAGCTGTCCTCCAGGACATACCACAACGCCCTTCGGCGGGTGTATGGTGGTACCCGACTGCTGCTTTAAACAGCAGCACTGACATGGAAACCCCTTTGCAGTTGCAGAACGATTTCCTTCAAGAGCAGCAGTTCCAGCATCACTGTAAGTACCAGCACTACTGCGGACCAGAGGAACGGCTCACTAAGGAGCGCAACCAATGCTGCACCTGCAATAACTGTACATGTGATGCAAGAAAAAGCCTAGTTTTTCGCGGGACGTCGCCGAACACTCAAGGAACTTTAAGGACGCCATCCGTAACGTATTCGAGGCAAGGTTCTCAGTTTAGCGTCTGTGAGTTCACGCCCTCCAGTCATGGTAGTTCATCCAGACATCATTACCATCAGCAGTGCTACAATCGGCAGCGGGGCAGCCCGAGCAGCAGCCACAGAGACAGTAACTCGTATAACGAAATAGCCATGAGTAGCTGCAGATACAACGGCGGCGTAATGCGACCGCTGAGCAACTTGAGCTCGTCCCGCAGAAACCTACACGAGTTTGATTCCGAATCCCAGCCTTTACAACCAATCTCTACCGCAGATGCGTCGGACACCCTAGCCTCTAAACCGGAGAACAATTCCACCACCCTAATGCCTTATGCATCGGGAGACGGAGGGGGTGGATGTAACAACAGTGGCAGTAAATCGGGTAAAAAGAAGAACCAGAACATTGGGCAAAAGCTTGGACATAGAAGGGCCTTGTTTGAGAAAAGGAAGCGTCTCAGCGACTATGCTTTGATCTTTGGGATGTTTGGGATcgtagttatggttatagagaCTGAACTCTCATGGGGAGCCTATGGAAAGGAGTCATTGTATTCATTAGCTCTAAAATGCCTGATAAGCCTTTCTACAATCATTCTTCTTGGTCTGATTATCATATACCACGCAAGGGAGATTCAGTTATTCATGGTAGACAATGCAGCAGATGACTGGAGGATAGCCATGACCTACGAGCGCATCTTCTTCATCTGCCTGGAGATCCTGGTGTGCGCCATCCACCCCATCCCAGGGAACTACACCTTCACCTGGACAGCGCGCCTGGCCTTCTCCTACACCCCGTCCAAGACGGACGCAGACGTGGACATCATCCTGTCTATCCCCATGTTCTTGCGGCTGTATCTCATCGCCCGCGTCATGCTGCTCCACAGCAAGCTCTTCACAGACGCCTCGTCCCGCAGTATCGGGGCGCTCAACAAAATCAACTTCAACACACGCTTTGTCATGAAGACCCTGATGACCATCTGCCCTGGCACCGTGTTGCTGGTCTTTACCATCTCGTTGTGGATCATCGCTGCGTGGACCGTGAGGGCCTGCGAGAGATACCATGACAACATGGACATAACCAGCAACTTCCTAGGAGCCATGTGGTTGATCTCAATCACTTTTCTAACCATTGGATATGGGGACATGGTCCCCAACACTTACTGTGGAAAAGGAGTCTGTCTCCTCACTGGTATTATGGGAGCCGGCTGCACAGCCTTGGTAGTGGCTGTGGTTGCAAAGAAACTGGAGTTAACCAAAGCTGAAAAACATGTTCATAATTTTATGATGGACACCCAGCTGACAAAAAGAGTGAAAAACACTGCTGCAAATGTACTCAGGGAGACGTGGCTCATCTACAAGAACACCAAACTGGTGAGGAAAATGGACCATGCCAGAGTCAGGAAGCACCAGAGGAAATTCCTCCAAGCCATTCATCAAGCTCGAAAactCAGAACATCATGTATGACCTGATCTCAGACCTGaacgagagaggggaggacatggAGAAGAGGATCGCCATGCTGGAGACCAAGCTGGAGACTCTGCTGGGGAACCTGCAGGCCCTGCCAGGACTCATCAGCCAGGTCATCAGCCAGCAGCACAGGGACTTCCTGGAGGTGCA
>XM_021601251.2
TATCTCGGTGTTCATACTTGAACAGTCTCACTTGTAAGACATTGTTTTTCTCTACTGACATGCTACTTTCCTTGAATGAATATTCGAAAAAATGTTGCAACCTTTTCAATGACGTCAAGACGGTTGTTTTGGTCCTGTCTATCCAATTGGAGCCATCACTTACATTCTACAGGAGCCGAAATGGGTCTAATCTTGCTCCGTAGCTGTCCTCCAGGACATACCACAACGCCCTTCGGCGGGTGTATGGTGGTACCCGACTGCTGCTTTAAACAGCAGCACTGACATGGAAACCCCTTTGCAGTTGCAGAACGATTTCCTTCAAGAGCAGCAGTTCCAGCATCACTGTAAGTACCAGCACTACTGCGGACCAGAGGAACGGCTCACTAAGGAGCGCAACCAATGCTGCACCTGCAATAACTGTACATGTGATGCAAGAAAAAGCCTAGTTTTTCGCGGGACGTCGCCGAACACTCAAGGAACTTTAAGGACGCCATCCGTAACGTATTCGAGGCAAGGTTCTCAGTTTAGCGTCTGTGAGTTCACGCCCTCCAGTCATGGTAGTTCATCCAGACATCATTACCATCAGCAGTGCTACAATCGGCAGCGGGGCAGCCCGAGCAGCAGCCACAGAGACAGTAACTCGTATAACGAAATAGCCATGAGTAGCTGCAGATACAACGGCGGCGTAATGCGACCGCTGAGCAACTTGAGCTCGTCCCGCAGAAACCTACACGAGTTTGATTCCGAATCCCAGCCTTTACAACCAATCTCTACCGCAGATGCGTCGGACACCCTAGCCTCTAAACCGGAGAACAATTCCACCACCCTAATGCCTTATGCATCGGGAGACGGAGGGGGTGGATGTAACAACAGTGGCAGTAAATCGGGTAAAAAGAAGAACCAGAACATTGGGCAAAAGCTTGGACATAGAAGGGCCTTGTTTGAGAAAAGGAAGCGTCTCAGCGACTATGCTTTGATCTTTGGGATGTTTGGGATcgtagttatggttatagagaCTGAACTCTCATGGGGAGCCTATGGAAAGGAGTCATTGTATTCATTAGCTCTAAAATGCCTGATAAGCCTTTCTACAATCATTCTTCTTGGTCTGATTATCATATACCACGCAAGGGAGATTCAGTTATTCATGGTAGACAATGCAGCAGATGACTGGAGGATAGCCATGACCTACGAGCGCATCTTCTTCATCTGCCTGGAGATCCTGGTGTGCGCCATCCACCCCATCCCAGGGAACTACACCTTCACCTGGACAGCGCGCCTGGCCTTCTCCTACACCCCGTCCAAGACGGACGCAGACGTGGACATCATCCTGTCTATCCCCATGTTCTTGCGGCTGTATCTCATCGCCCGCGTCATGCTGCTCCACAGCAAGCTCTTCACAGACGCCTCGTCCCGCAGTATCGGGGCGCTCAACAAAATCAACTTCAACACACGCTTTGTCATGAAGACCCTGATGACCATCTGCCCTGGCACCGTGTTGCTGGTCTTTACCATCTCGTTGTGGATCATCGCTGCGTGGACCGTGAGGGCCTGCGAGAGATACCATGACAACATGGACATAACCAGCAACTTCCTAGGAGCCATGTGGTTGATCTCAATCACTTTTCTAACCATTGGATATGGGGACATGGTCCCCAACACTTACTGTGGAAAAGGAGTCTGTCTCCTCACTGGTATTATGGGAGCCGGCTGCACAGCCTTGGTAGTGGCTGTGGTTGCAAAGAAACTGGAGTTAACCAAAGCTGAAAAACATGTTCATAATTTTATGATGGACACCCAGCTGACAAAAAGAGTGAAAAACACTGCTGCAAATGTACTCAGGGAGACGTGGCTCATCTACAAGAACACCAAACTGGTGAGGAAAATGGACCATGCCAGAGTCAGGAAGCACCAGAGGAAATTCCTCCAAGCCATTCATCAactCAGAACATCATGTATGACCTGATCTCAGACCTGaacgagagaggggaggacatggAGAAGAGGATCGCCATGCTGGAGACCAAGCTGGAGACTCTGCTGGGGAACCTGCAGGCCCTGCCAGGACTCATCAGCCAGGTCATCAGCCAGCAGCACAGGGACTTCCTGGAGGTGCA
>NM_001124311.1
ATGAGTAGCTGCAGATACAACGGCGGCGTAATGCGACCGCTGAGCAACTTGAGCTCGTCCCGCAGAAACCTACACGAGTTTGATTCCGAATCCCAGCCTTTACAACCAATCTCTACCGCAGATGCGTCGGACACCCTAGCCTCTAAACCGGAGAACAATTCCACCACCCTAATGCCTTATGCATCGGGAGACGGAGGGGGTGGATGTAACAACAGTGGCAGTAAATCGGGTAAAAAGAAGAACCAGAACATTGGGCAAAAGCTTGGACATAGAAGGGCCTTGTTTGAGAAAAGGAAGCGTCTCAGCGACTATGCTTTGATCTTTGGGATGTTTGGGATcgtagttatggttatagagaCTGAACTCTCATGGGGAGCCTATGGAAAGGAGTCATTGTATTCATTAGCTCTAAAATGCCTGATAAGCCTTTCTACAATCATTCTTCTTGGTCTGATTATCATATACCACGCAAGGGAGATTCAGTTATTCATGGTAGACAATGCAGCAGATGACTGGAGGATAGCCATGACCTACGAGCGCATCTTCTTCATCTGCCTGGAGATCCTGGTGTGCGCCATCCACCCCATCCCAGGGAACTACACCTTCACCTGGACAGCGCGCCTGGCCTTCTCCTACACCCCGTCCAAGACGGACGCAGACGTGGACATCATCCTGTCTATCCCCATGTTCTTGCGGCTGTATCTCATCGCCCGCGTCATGCTGCTCCACAGCAAGCTCTTCACAGACGCCTCGTCCCGCAGTATCGGGGCGCTCAACAAAATCAACTTCAACACACGCTTTGTCATGAAGACCCTGATGACCATCTGCCCTGGCACCGTGTTGCTGGTCTTTACCATCTCGTTGTGGATCATCGCTGCGTGGACCGTGAGGGCCTGCGAGAGATACCATGACAACATGGACATAACCAGCAACTTCCTAGGAGCCATGTGGTTGATCTCAATCACTTTTCTAACCATTGGATATGGGGACATGGTCCCCAACACTTACTGTGGAAAAGGAGTCTGTCTCCTCACTGGTATTATGGGAGCCGGCTGCACAGCCTTGGTAGTGGCTGTGGTTGCAAAGAAACTGGAGTTAACCAAAGCTGAAAAACATGTTCATAATTTTATGATGGACACCCAGCTGACAAAAAGAGTGAAAAACACTGCTGCAAATGTACTCAGGGAGACGTGGCTCATCTACAAGAACACCAAACTGGTGAGGAAAATGGACCATGCCAGAGTCAGGAAGCACCAGAGGAAATTCCTCCAAGCCATTCATCAAGCTCGAAAATTGAGAAGTGTTAAAATGGAGCAACGCAAGCTGAATGACCAAGCAAACTCACTAGTGGACCTTGCAAAGactCAGAACATCATGTATGACCTGATCTCAGACCTGaacgagagaggggaggacatggAGAAGAGGATCGCCATGCTGGAGACCAAGCTGGAGACTCTGCTGGGGAACCTGCAGGCCCTGCCAGGACTCATCAGCCAGGTCATCAGCCAGCAGCACAGGGACTTCCTGGAGGTGCAGCTCCAGCCATACGACAAACACAGCCCTGAGCGCTCACAGTCTGTCTCCAGACGGAGGTCGTCCTCCACGGCACCACCCACCTCCTCCGAGAGCAGCTAG

Function

NR:

description
PREDICTED: small conductance calcium-activated potassium channel protein 2-like isoform X2

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005516 calmodulin binding molecular_function
GO:0016286 small conductance calcium-activated potassium channel activity molecular_function

KEGG:

id description
K04943 KCNN2, KCA2.2; potassium intermediate/small conductance calcium-activated channel subfamily N member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601250.2 False 2126 mRNA 0.50 8 35930114 35960210
XM_021601251.2 False 2117 mRNA 0.50 7 35930114 35960210
NM_001124311.1 True 1638 mRNA 0.51 9 35930772 35960310

Neighbor

gene id symbol gene type direction distance location
sppl3 LOC106565002 coding upstream 67488 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 262924 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 279111 35639728 ~ 35651003 (+)
atp8b5b LOC106565083 coding upstream 309566 35602601 ~ 35620548 (+)
unc13bb LOC106565090 coding upstream 334496 35546545 ~ 35595618 (+)
drg1 drg1 coding downstream 2891 35963201 ~ 35966744 (+)
slc20a1b LOC106564912 coding downstream 45896 36006206 ~ 36019354 (+)
you2 you2 coding downstream 72951 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 82208 36042518 ~ 36056035 (+)
LOC110523692 LOC106564846 coding downstream 124814 36085124 ~ 36120105 (+)
G394885 NA non-coding upstream 11261 35908309 ~ 35918853 (+)
G394883 NA non-coding upstream 23896 35906011 ~ 35906218 (+)
G394881 NA non-coding upstream 27387 35902510 ~ 35902727 (+)
G394879 NA non-coding upstream 28684 35901208 ~ 35901430 (+)
G394870 NA non-coding upstream 44281 35878968 ~ 35885833 (+)
G394923 NA non-coding downstream 17546 35977856 ~ 35983731 (+)
G394958 NA non-coding downstream 139063 36099373 ~ 36108885 (+)
G394970 LOC106563191 non-coding downstream 159996 36120306 ~ 36121931 (+)
G395041 nfkbil1 non-coding downstream 299841 36260151 ~ 36261227 (+)
G395035 NA non-coding downstream 322421 36282731 ~ 36288452 (+)
G394882 NA other upstream 24333 35905112 ~ 35905781 (+)
G392776 NA other upstream 1781413 34147474 ~ 34150795 (+)
G391805 NA other upstream 2568773 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2767134 33158826 ~ 33162980 (+)
G390393 NA other upstream 3709581 32220181 ~ 32220533 (+)
G394910 NA other downstream 6627 35966937 ~ 36004829 (+)
G395005 LOC106564805 other downstream 242591 36202901 ~ 36206616 (+)
G395034 NA other downstream 319990 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 1004774 36965084 ~ 36965652 (+)

Expression


Co-expression Network