btbd2a (LOC106613767)


Basic Information

Item Value
gene id btbd2a
gene name LOC106613767
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63303764 ~ 63314291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603790.2
ATCAGATTGGTTCATATTTGCTGAGTGAATCATATTTCTGCTCTCATTTTGGCATGTGTTTTGATAATGTACTCTTGGATCTAAAGTGATATTACAACAATACTATTCGGCCTATCCCTGGGAGATTGTTTTTCTTCGAGGCTAATCATCATCAGTTATAAGTAATTGGACATAAGATCTCTGTGATTAGTTTTACTTTGTCCCAAATAGACATCAATAGCCTATCCCATCTCATTATATTGGGTAAGTAAAATCATATATCCTATACTGTTTAGAACAGTAGTTCAAACGTGCACATTTGGAAACTTAGATATAGACCGTCTCTATGAAGAATGTAAGATTGATGGTATGTATTTGTAGGAGGTGAGAACAGGTAGGCTAATACAAAACACATCTTAAAATGTCTGAATTCAGAAAGAAAATGTATTGACTAGGCCTCATCAATGGAGAGGCGAATAATTTGAACTGAATACATATTTATCTGCTAGGTGTAAGTAACACGAATAatgtatgtaggcctacattatttcATATTTGCATACCCGTGCATCAAAAAAGTAAGCCTGCAGTTTTGAATTAATAAATACTAGCTCCATGGTTGGGGAATATAATAGCTCATCATAAGCTCATTGATGTTCATTTGTCTAATAAACTATAGCAAATTAATATGATGACACCATGATACATATGCAGCCTTTGGTATTATTGGCTGCTATTGAGTGTCCAGACAATTTAGGCCACCTTCGTCCTCAGTCTCCAGCCTCATGTGAGGTTCACTCATTCCGCCTGTGTTTCTGGGTATGCGCTGTTGTGCTTGTTTATCTCAGCAGCAAACCCTGCAGTGTTCTCCATCCAAAATGGCTGCGGAGGAGGAGAGCAATAGCAGAGCTCCATGTCTCAATTTTTCCAGTCCCGGACCGCTGGGTAATGCTCAGCCGAGCAACAACGCCCATTCCTCGCCTGCTACAAATGAGGGGTCAGCGGGTGCAACTGGAGGGGCACCACGGACAGCGGGACACTCAAACCCTCAACCAGGCCCTGACCGTGGCGGTGGCACCGATGTCAGAGTAGAGCATTCCCCGAATAGGCAACACACTACGCCACAGTCAGCGGGTCAGAGTGCCACGGCTGCCCGGGCACCGACAGTCGCAGGAGGAGCTGCGACAAACATGACAGCATCCTCCGTGGAGTCGCCGAACATTTCATCCTCACTTCCCAGTAGCCCTGCATCTGCGGCCGTATTGGTTTATCGGGAGCCAGTGTACAACTGGCAGGCCACAAAAAACACAGTGAAAGAAAGGTTTGCGTTTTTGTTCAACAACGAGGTGCTGAGTGACGTGCATTTTCTGGTGGGGAAGGGAATGGGAGTGCAGCGGATACCAGCACACAGATTTGCCCTTGCCGTAGGAAGTGCAGTATTCGATGCCATGTTCAATGGCGGTATGGCCACCACCTCTACTGAGATCGAGCTGCCTGACGTGGAGCCGGCTGCATTCCTTGCCCTGCTCAAGTTCCTGTACTCAGATGAGGTGCAGATAGGACCCGAGACTGTGATGACCACACTGTACACAGCCAAGAAGTATGCAGTGCCGGCCCTAGAGGCCCACTGTGTGGAGTTCCTCAAGAAGAATCTACGTGCTGACAATGCCTTCATGTTGCTCACTCAGGCGCGGCTCTTTGACGAACCTCAGCTGGCCAGCCTCTGTCTGGAGAACATCGACAAGAACACTGTGGATGCACTCGCTGCTGAGGGCTTCACTGATATTGATCTAGACACGCTGGTGGCGGTGCTGGAGAGGGACACTCTGGGGGTGCGGGAGGTACGTCTGTTTGGGGCTGCGGTGCGCTGGGCGGAGGCAGAAACCCAGAGGCAGCAGTACCAGCCCACTCCGGAGAACAAGCGCAAAGTGCTGGGCAAAGCCCTGGTCCTTATCCGCTTCCCTCTCATGACCATCGAGGAATTTGCTGCAGGTCCAGCCCAGTCTGGTATTCTTACTGACCAGGAGGTGGTGAGCCTGTTCCTTCACTTCACGGTGAACCCCAAGCCTCACGTGGAGTTCATCGACCGGCCTCGCTGCTGCCTGCGGGGGAAGGAGTGCAGCATCACACGCTTCGGACAGGTGGAGAGCCGCTGGGGCTACAGCGGGACCAGTGACTGTATCCGGTTTTCAGTGAATCGGAGGATATTTGTGGTTGGATTTGGCCTCTATGGTTCGATACATGGTCCTACAGACTACCAAGTCAATATACAGGTCATTCACACAGACAGCAACACTGTCCTGGGTCAGAACGACACAGGCTTCAGCTGCGACGGTTCCTCCAACACATTCCGGGTCATGTTTAAGGAACCAGTGGAGATCCTGCCCAGTGTCAACTACATCGCGTGTGCCACCCTCAAGGGACCAGACTCGCACTATGGCACCAAAGGAATGCGTAAAGTGACCCACGAAGCCCCTGCCACCGGCACCAAGACCTGCTTCACCTTCTGCTATGCTGCAGGAAACAACAACGGCACTTCAGTAGAGGACGGACAGATCCCTGAGGTCATCTTCTACACATAATGAATCTCCTCTGACCTCCCAACCAAGGACTGGCTatatgtgtgtcccaaatgacaccttattGCCCATATAGTGCAAAGTAATACTTCAGGCAATAGTACAGCGCCTCTTTTCCTCATTAGTctttactactactacacttCATCAAAGGGTTGTCCTCTAAAGCTGGTTACACAGGAAGACTAATTCAAtcattttttccactaattggtcttttgaccaatcagatcatcGTGATTGTTCAAAAGAGCAAGTAGTGGAAAATATCAGAATTGTGTAAAATCAGCCTATGAATGGTAAGCTGACATGGTAAATCTAACCAGGACCTGGTTGTTACAAACTTCTGAAATTCATGTTGGATCTTTGTGCATACAGTATTGAATGGGTAATTGTTTAGTTCAGTGTTTCCACCAATAAGCACACTTTTGTAGCCCTGgataagcacacctgattcaacttgtcaactaatcaagCCCCTGAGTTGAGGTGAGATTTTGTcgagggctacaacaaaaatgtgttagGGATAcccaaggactggagttgggaaatgCTGCTTTAGTGGTTGTGTTCATCTTTCCTGTCTAGACTGATGTGACGGAAATAAGTAATATCAGGTAATTAACAGATGCGAAATCTGGGAAAAAAAGTCTACCCATACCTCAGTGAAAGAAAGTCCCCAAATGGTTGCTAGGTTTAATCTTAACCGCTTCCAATGGCTGTGTAGAATTGTGAAAGCGCAGAAATTGAATTACTTTTTCAATTGAGAAAATGATTTAGTTGCACTGATGCACTTTGACAGGAAACTGACAATTAAACCCTGCCTGTAAGTTCACTATATTATAAAATTGAGTAATCCCTGAAATTCAATACATTTCAGGAACTGTTGGCCTACCTGGTGAATCAAACATGTTACTCTACCAGTATAGTGAACCAAAATTGGTATAGATGAAAATGAACAATTGTCATTTAATGTATGGTGAATTGAAATTCAAAAGTTGAGTTCACCACTGCTTTACAGTTTGCTTAGATCTGTAAATAGTAAAATAAGCAAGGGTCTTGTTTTGGGTGCCATTCTGTGGAGCCGTAGTGCCAGGAAGGCATGTTTGCTGTCTCATTTTTCATGCAAGTTCGAGAGAAATTTGTACATACTCAATTGCATGCTTGCGAAATGCAACAAATTGATTAACTTTTCTTGTCTAGGTATACCGCCTGCGTGGCAGGAGGCAATTGCCTAAGAT

Function

NR:

description
BTB/POZ domain-containing protein 2-like

GO: NA

KEGG:

id description
K10477 BTBD1_2; BTB/POZ domain-containing protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603790.2 True 3802 mRNA 0.46 9 63303764 63314291

Neighbor

gene id symbol gene type direction distance location
LOC110524283 LOC106613765 coding downstream 21116 63274631 ~ 63282648 (-)
LOC110524282 LOC106584262 coding downstream 43283 63257597 ~ 63260481 (-)
LOC110524279 LOC106613762 coding downstream 88861 62919578 ~ 63214903 (-)
LOC110524277 LOC106613757 coding downstream 495588 62803832 ~ 62808176 (-)
LOC118964634 NA coding downstream 506524 62796617 ~ 62797240 (-)
si:dkey-110c1.10 LOC106613769 coding upstream 66508 63380799 ~ 63402249 (-)
LOC110524293 LOC106613771 coding upstream 88155 63402446 ~ 63409451 (-)
LOC110524290 LOC106613772 coding upstream 103673 63417964 ~ 63443429 (-)
LOC110524292 LOC106613773 coding upstream 148213 63462504 ~ 63491605 (-)
LOC110524297 LOC106613775 coding upstream 178136 63492427 ~ 63502367 (-)
G425820 NA non-coding downstream 12987 63290446 ~ 63290777 (-)
G425881 NA non-coding downstream 13752 63289718 ~ 63290012 (-)
G425878 NA non-coding downstream 16369 63287072 ~ 63287395 (-)
G425870 NA non-coding downstream 33946 63269501 ~ 63269818 (-)
G425886 NA non-coding upstream 8180 63322471 ~ 63323012 (-)
G425892 NA non-coding upstream 18767 63333058 ~ 63333575 (-)
G425811 NA non-coding upstream 95507 63409798 ~ 63417187 (-)
G425962 NA non-coding upstream 196897 63511188 ~ 63511413 (-)
G425963 NA non-coding upstream 198609 63512900 ~ 63513962 (-)
G425810 LOC106613766 other downstream 370 63300924 ~ 63303394 (-)
G425647 NA other downstream 403261 62894659 ~ 62900503 (-)
G425612 NA other downstream 453517 62850004 ~ 62850247 (-)
LOC110522986 LOC106613472 other upstream 969677 64283744 ~ 64297376 (-)
G427287 NA other upstream 1252390 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 1387583 64701867 ~ 64810664 (-)
LOC110524332 LOC106613803 other upstream 1590754 64903039 ~ 64911196 (-)
G427902 ubxn6 other upstream 1685417 64999708 ~ 65011598 (-)

Expression


Co-expression Network