XLOC_022966



Basic Information


Item Value
gene id XLOC_022966
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 25236206 ~ 25237572 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00047007
atggaaatgcGGGTAAACTTATGGCCTTTTTACCCATATTCTTCAAAATCTCTATTTTTCACGCACGCATAAATGTTTGATAAAACTTGAGATGAGATGTCTCAGTGACACCTTTTAGTGGTTGTTTTTTTCGGTCTGCTGTGGAATTCACAGAAACTGGTTTCATGTTGGATAGGACATTGAGTCGATGGAATGATGACTGGAATCTGATCTATCCTCTTCTGTCAGAGGttgaagcatgttgaaaattagaAGGGTAGAAGACGGAAGTCCTTcagtatacaaaaaaaaacattgtctaaAATCTTCAAGCTTGAAGGTCTTAATGCTGGTAGTTTGTTCAGGGCCTTTTCCTGTTGAATGTTGAATGAGAGGCAAAGTTTGTTTTATATCACAGAGTTCTCCAGTTTGGATGTTCCATTGGTTTTTCCTTGCTTTTCCTTCATCTCTTCAGAGCTATGATCTGAtgtcttttgttttttacaaaTTACCTTCTGCAGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00047007 True 501 lncRNA 0.37 2 25236206 25237572

Neighbor


gene id symbol gene type direction distance location
XLOC_022965 cip2a coding upstream 2455 25210015 ~ 25233751 (+)
XLOC_022964 si:ch73-264p11.1 coding upstream 31066 25191415 ~ 25205140 (+)
XLOC_022963 NA coding upstream 51592 25144175 ~ 25184614 (+)
XLOC_022962 NA coding upstream 149131 25085138 ~ 25087075 (+)
XLOC_022961 amer2 coding upstream 163174 25069609 ~ 25073032 (+)
XLOC_022967 gabrr3b coding downstream 21332 25258904 ~ 25284835 (+)
XLOC_022968 NA coding downstream 96260 25333832 ~ 25375490 (+)
XLOC_022969 smpx coding downstream 229893 25467465 ~ 25500712 (+)
XLOC_022970 camk2n2 coding downstream 455230 25692802 ~ 25695056 (+)
XLOC_022971 NA coding downstream 471289 25708861 ~ 25728692 (+)
XLOC_022959 CR383672.1 non-coding upstream 243104 24983135 ~ 24993102 (+)
XLOC_022958 NA non-coding upstream 294005 24938757 ~ 24942201 (+)
XLOC_022952 NA non-coding upstream 777760 24453041 ~ 24458446 (+)
XLOC_022972 NA non-coding downstream 525440 25763012 ~ 25765640 (+)
XLOC_022980 dre-mir-727 non-coding downstream 947838 26185410 ~ 26185500 (+)
XLOC_022981 dre-mir-728 non-coding downstream 952980 26190552 ~ 26190634 (+)

Expression



Co-expression Network