G361639


Basic Information

Item Value
gene id G361639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5773530 ~ 5774132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410991
ctgtgtggtggtagaggtagtctctgtgtggtggtagaggtagtctagtctctgtgtggtggtagaggtagtctctgtgtggtggtagaggtagtctctgtgtggtggtagaggtagtctctgtgtggtggtagaggtagtctagtctctgtgtggtggtagaggtagtctagTGTCTGTGTGGTGGTACCAATCTTTTTTTTGGCCTGTCATTTCCAATGTATTCATGTCATTTTGAGAAATGATTTGTATATCCCCGAAAGATCGTTGATATTTCATGGCAAGCAGCGTTATTTATTATTTGACAACAGGTCTAGTCTCTGTGTTGCCATTCTTCAATTGCCTGTCATTTCCAGTTGATTATAGAAACCCTTCTAAGTATCTTAGCCATGAAATCATAATTATCCCCTGTTATTTGTTGTGTCACATCTGATTACCAGGCTGGCTGACTCTCTAAAGACATTCTATCCATCACAAATTAGGGAGCAGAGCAGGAAAAAATTAACAACATTGTATTGCTTTCCTGCAGACCATCGTCTACAGTCTACAGCATCTTCAATGCGATTGTAAATATCCAAGAAACGTCATTAAAGAGTAATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410991 True 603 lncRNA 0.41 1 5773530 5774132

Neighbor

gene id symbol gene type direction distance location
LOC110522836 LOC105008486 coding upstream 12582 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 195590 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 314665 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 434191 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 1102945 4654146 ~ 4670585 (+)
LOC110523126 LOC106572095 coding downstream 714270 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1228320 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 1956852 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 1968115 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 2476027 8250159 ~ 8289257 (+)
G361637 NA non-coding upstream 5113 5768148 ~ 5768417 (+)
G361541 NA non-coding upstream 9915 5763263 ~ 5763615 (+)
G361575 NA non-coding upstream 23547 5749543 ~ 5749983 (+)
G361566 NA non-coding upstream 45540 5726935 ~ 5727990 (+)
G361557 NA non-coding upstream 64834 5708301 ~ 5708696 (+)
G361652 NA non-coding downstream 10827 5784959 ~ 5785294 (+)
G361665 NA non-coding downstream 26399 5800531 ~ 5800818 (+)
G361671 NA non-coding downstream 29696 5803828 ~ 5927926 (+)
G361680 NA non-coding downstream 67492 5841624 ~ 5849054 (+)
G361681 NA non-coding downstream 71144 5845276 ~ 5852491 (+)
G360985 NA other upstream 474127 5296870 ~ 5299403 (+)
G360276 sync other upstream 1125530 4639016 ~ 4648000 (+)
G360287 NA other upstream 1225674 4547035 ~ 4547856 (+)
G360261 NA other upstream 1353461 4419741 ~ 4420069 (+)
G360234 NA other upstream 1428013 4344082 ~ 4345517 (+)
G362297 zbtb43 other downstream 1411794 7185926 ~ 7189819 (+)
G362554 NA other downstream 1916308 7690440 ~ 7692514 (+)
G362662 NA other downstream 2144790 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3001200 8775134 ~ 8849107 (+)

Expression


Co-expression Network