Gene
RNA
| Item | Value |
|---|---|
| gene id | G377195 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20917187 ~ 20917779 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428738 | True | 461 | lncRNA | 0.38 | 2 | 20917187 | 20917779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523395 | LOC106568500 | coding | upstream | 6550 | 20898121 ~ 20910637 (+) |
| LOC110522818 | LOC106568484 | coding | upstream | 19320 | 20881938 ~ 20897867 (+) |
| pnx | LOC106568480 | coding | upstream | 57425 | 20858342 ~ 20859762 (+) |
| LOC110522817 | LOC106568462 | coding | upstream | 74511 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | coding | upstream | 157932 | 20508074 ~ 20759255 (+) |
| ccar2 | LOC106568504 | coding | downstream | 5235 | 20923014 ~ 20944043 (+) |
| LOC110523398 | LOC100534606 | coding | downstream | 34370 | 20952149 ~ 20991376 (+) |
| LOC110522819 | LOC106568526 | coding | downstream | 133157 | 21050936 ~ 21099289 (+) |
| LOC110523400 | LOC106568542 | coding | downstream | 190350 | 21108129 ~ 21160149 (+) |
| npm2b | LOC106592477 | coding | downstream | 359789 | 21277568 ~ 21288531 (+) |
| G377186 | NA | non-coding | upstream | 2654 | 20914152 ~ 20914533 (+) |
| G377144 | LOC100194676 | non-coding | upstream | 66047 | 20849654 ~ 20851140 (+) |
| G377143 | LOC100194676 | non-coding | upstream | 70247 | 20800061 ~ 20846940 (+) |
| G377125 | NA | non-coding | upstream | 156702 | 20759746 ~ 20760485 (+) |
| G377107 | NA | non-coding | upstream | 174544 | 20709523 ~ 20742643 (+) |
| G377197 | NA | non-coding | downstream | 3356 | 20921135 ~ 20921358 (+) |
| G377198 | NA | non-coding | downstream | 4098 | 20921877 ~ 20922095 (+) |
| G377188 | LOC106581475 | non-coding | downstream | 28750 | 20946529 ~ 20992976 (+) |
| G377184 | NA | non-coding | downstream | 75926 | 20993705 ~ 20996708 (+) |
| G377022 | NA | other | upstream | 320324 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 933339 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 2833822 | 18067350 ~ 18177035 (+) |
| G378660 | NA | other | downstream | 1254756 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1585973 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1684331 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 2024513 | 22942205 ~ 23007315 (+) |
