G384773


Basic Information

Item Value
gene id G384773
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27370929 ~ 27371347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437087
gagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgaggacacccccggacagggcctaacaggaaggatataaccccacccactttgccaaagcacagcccctacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggctgagtatagcccacaaagaGGGGgcggcgccaacccagacaggatgaccacatcagttaatcaacccactcaggtgacgcaccccctccagggacggcatgagagagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU437087 True 393 lncRNA 0.54 2 27370929 27371347

Neighbor

gene id symbol gene type direction distance location
LOC110523522 arpc3 coding upstream 475833 26892472 ~ 26895096 (+)
atpbb LOC106566318 coding upstream 478509 26889974 ~ 26892420 (+)
LOC110523521 vps29 coding upstream 483284 26884887 ~ 26887645 (+)
noc4l noc4l coding upstream 486337 26877516 ~ 26884592 (+)
pus1 pus1 coding upstream 493712 26854071 ~ 26877217 (+)
LOC110523526 LOC106566370 coding downstream 214258 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding downstream 240410 27611757 ~ 27613814 (+)
LOC110523527 LOC106567169 coding downstream 287797 27659144 ~ 27664034 (+)
LOC110522888 LOC106566402 coding downstream 304015 27675352 ~ 27719165 (+)
LOC118964522 NA coding downstream 364531 27735878 ~ 27741089 (+)
G384770 NA non-coding upstream 2236 27368457 ~ 27368693 (+)
G384200 sfswap non-coding upstream 104419 27262252 ~ 27266510 (+)
G384092 NA non-coding upstream 233196 27137530 ~ 27137733 (+)
G384090 NA non-coding upstream 237797 27132841 ~ 27133132 (+)
G384088 NA non-coding upstream 243523 27127197 ~ 27127406 (+)
G384917 NA non-coding downstream 113007 27484354 ~ 27484556 (+)
G384972 NA non-coding downstream 177387 27548734 ~ 27678932 (+)
G385044 NA non-coding downstream 316808 27688155 ~ 27688671 (+)
G385139 NA non-coding downstream 485333 27856680 ~ 27856887 (+)
G385144 NA non-coding downstream 491943 27863290 ~ 27891266 (+)
G383794 LOC106566282 other upstream 707316 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 910233 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 1184239 26174884 ~ 26186710 (+)
G382186 NA other upstream 2145199 25225442 ~ 25225730 (+)
G381239 NA other upstream 2594500 24687739 ~ 24776429 (+)
G385053 NA other downstream 335367 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 533120 27904467 ~ 27904731 (+)
G385805 NA other downstream 1045258 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1554930 28926263 ~ 28931410 (+)

Expression


Co-expression Network