G385726


Basic Information

Item Value
gene id G385726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28245238 ~ 28245543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438120
gtggagatgttgttacctaccctcaccacctgggggtggcccgtcaggaagtccagtacccagttgcacagggcagggtcgagacccagggtctcgagcttgatgacgagtttggagggtactatggtgttaaatactgagctgtaggtgatgaacagcattctcacataggtattcttcttgtccagatgggttagggcagtgtgcagtgtggttgcgattgcgttgtctgtggacctattggggcagtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438120 True 306 lncRNA 0.53 1 28245238 28245543

Neighbor

gene id symbol gene type direction distance location
LOC110523538 NA coding upstream 3568 28239115 ~ 28241670 (+)
ftsj1 LOC106566467 coding upstream 9738 28228013 ~ 28235500 (+)
LOC110523534 LOC106566461 coding upstream 132459 28109822 ~ 28112779 (+)
LOC110523531 LOC106566436 coding upstream 177265 28052621 ~ 28067973 (+)
si:ch211-222n4.2 LOC106566406 coding upstream 229186 28008073 ~ 28016052 (+)
LOC110518653 LOC106566474 coding downstream 12424 28257967 ~ 28261576 (+)
LOC118964581 NA coding downstream 16234 28261777 ~ 28264335 (+)
ank1b LOC106566514 coding downstream 24294 28269837 ~ 28346918 (+)
LOC118964582 NA coding downstream 52180 28297723 ~ 28303108 (+)
rnf180 LOC106566588 coding downstream 161181 28406724 ~ 28416408 (+)
G385715 NA non-coding upstream 27010 28217811 ~ 28218228 (+)
G385714 NA non-coding upstream 29501 28215480 ~ 28215737 (+)
G385693 NA non-coding upstream 66424 28163534 ~ 28178814 (+)
G385675 LOC106566140 non-coding upstream 68277 28160844 ~ 28176961 (+)
G385679 LOC106566140 non-coding upstream 83258 28145817 ~ 28161980 (+)
G385730 NA non-coding downstream 5480 28251023 ~ 28251335 (+)
G385733 NA non-coding downstream 8321 28253864 ~ 28256824 (+)
G385809 NA non-coding downstream 29414 28274957 ~ 28275246 (+)
G385812 NA non-coding downstream 31678 28277221 ~ 28277456 (+)
G385816 NA non-coding downstream 36818 28282361 ~ 28282569 (+)
G385171 LOC106566130 other upstream 340507 27904467 ~ 27904731 (+)
G385053 NA other upstream 538160 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 561845 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1581625 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1784542 26437517 ~ 26502284 (+)
G385805 NA other downstream 171062 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 680734 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1496257 29741800 ~ 29763439 (+)
G387516 NA other downstream 1651443 29896986 ~ 29898134 (+)
G388019 NA other downstream 2041408 30286951 ~ 30287824 (+)

Expression


Co-expression Network