G385843


Basic Information

Item Value
gene id G385843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28359378 ~ 28360037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438255
GAATATAGCTCAGAGCATGGTCTCTAACCAATCCCCTTTCATTAGCAGGTTGTGGGAATGTTGGCACTTAACTCATCTGGCCACAAGCTGAACAGATAAATGGTGACTGGTTGTTGTAGCCTGACAGAGATCCAATGTGGGTCAGTAACACATTCACAGGTACACTGCTGCCATGACGTGAAACACAGAACCCTGTTTGTGATCTCTCTCACTGTCGATCGACCTCCACCAAACCCACCCAGGTACACAAAACATCTACGACCGGAAGTTCCTCCTGGAGTGTCAAACCTCCCCTCTGACATGCACCCCTCCCTGTCTTCCTGATATTCCAGGGGTAACCAAACCCCTCTCAAACAACACTGCGACTGACACAGCCCACCCCAAACAGACTCCCAACAACCACAATCCCCCAGCGGACAAGATCGCAGGGGAGGATGCTCAATTTGAAATGGACATATAGCCATTTGATGGATCTGCTGGATCTGCAGCCTTGAGGATGACAATGAAAGAGGGACTCATGTTTAAACGGTCTTTTTGGAAACAGCACA

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438255 True 548 lncRNA 0.49 2 28359378 28360037

Neighbor

gene id symbol gene type direction distance location
ank1b LOC106566514 coding upstream 12460 28269837 ~ 28346918 (+)
LOC118964582 NA coding upstream 56270 28297723 ~ 28303108 (+)
LOC118964581 NA coding upstream 95043 28261777 ~ 28264335 (+)
LOC110518653 LOC106566474 coding upstream 97802 28257967 ~ 28261576 (+)
LOC110523538 NA coding upstream 117708 28239115 ~ 28241670 (+)
rnf180 LOC106566588 coding downstream 46687 28406724 ~ 28416408 (+)
rgs7bpb LOC106566593 coding downstream 58185 28418222 ~ 28423947 (+)
ghr1 ghr1 coding downstream 79041 28439078 ~ 28463949 (+)
LOC110523547 ccdc152 coding downstream 104062 28464099 ~ 28467134 (+)
LOC110522905 LOC106563371 coding downstream 113510 28473547 ~ 28475595 (+)
G385837 NA non-coding upstream 24526 28334402 ~ 28334852 (+)
G385832 NA non-coding upstream 43420 28315735 ~ 28315958 (+)
G385831 NA non-coding upstream 43949 28315152 ~ 28315429 (+)
G385819 NA non-coding upstream 67097 28292081 ~ 28292281 (+)
G385845 NA non-coding downstream 5046 28365083 ~ 28366503 (+)
G385848 NA non-coding downstream 6720 28366757 ~ 28367894 (+)
G385856 NA non-coding downstream 20720 28380757 ~ 28380980 (+)
G385857 NA non-coding downstream 21620 28381657 ~ 28381889 (+)
G385864 NA non-coding downstream 28690 28388727 ~ 28388933 (+)
G385171 LOC106566130 other upstream 454647 27904467 ~ 27904731 (+)
G385053 NA other upstream 652300 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 675985 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1695765 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1898682 26437517 ~ 26502284 (+)
G385805 NA other downstream 56568 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 566240 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1381763 29741800 ~ 29763439 (+)
G387516 NA other downstream 1536949 29896986 ~ 29898134 (+)
G388019 NA other downstream 1926914 30286951 ~ 30287824 (+)

Expression


Co-expression Network