G385805


Basic Information

Item Value
gene id G385805
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28416605 ~ 28417555 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438217
GacgcaatcagttgtgttgtgacaaggtaagggtggtaaacagaagatagcaagtccaagtccatattatggcaagaacagctcaaataagcaaagagaaatgacagtccatcattactttcagacatgaaggtcagtcaatacggaaatgtcaactgcagttacaaaaaccatcaagcactatgatgaaactggctctcatgaggaccggcacaggaaagggagacccagagttacctctgctgcagaggataagttcattagagttaactgcacctcagaaattgcagcccaaaaaaaatgtttcacacagttcaagtaacagacacatcacaacatcaactggTCAGAGGAGaatgagtgaatcaggccttcatcgtcgaattgctgcaaagaaaccactacttaaggacactaataataataagaagagacttgcttgggccaagaaacacaaccaatggacattagaccagtggaaatctgtcctttggtctgatgagtccaaatgtgagatttttggttccaaccacggtGTCTTTTTGAGATGcatagtaggtgaacggattacctccgcatgtgtagttcccaccgtgaagcatggacgaggtggtgtgggtgtgctttgccggtgacactgtctgatttgatttagaattcaacgcacacttaaccagcatggctaccacagcattctgcagcgatacactgtcccatctggtttgcgcttagtggaactaacatttttcaacaggacaatgacccaacacacctccaagctgtgtaagggctatttgaccaataaggagagtgatggagtgctgcatcagatctgatctggcctccacaatcacccaaactcaacccaatggagatgagttggactgcagagtgacggaaaagcagccaacaagtgctcagcatatgtgggaagactgttggaaaagcatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438217 True 951 TUCP 0.45 1 28416605 28417555

Neighbor

gene id symbol gene type direction distance location
rnf180 LOC106566588 coding upstream 197 28406724 ~ 28416408 (+)
ank1b LOC106566514 coding upstream 69687 28269837 ~ 28346918 (+)
LOC118964582 NA coding upstream 113497 28297723 ~ 28303108 (+)
LOC118964581 NA coding upstream 152270 28261777 ~ 28264335 (+)
LOC110518653 LOC106566474 coding upstream 155029 28257967 ~ 28261576 (+)
rgs7bpb LOC106566593 coding downstream 667 28418222 ~ 28423947 (+)
ghr1 ghr1 coding downstream 21523 28439078 ~ 28463949 (+)
LOC110523547 ccdc152 coding downstream 46544 28464099 ~ 28467134 (+)
LOC110522905 LOC106563371 coding downstream 55992 28473547 ~ 28475595 (+)
LOC110523549 LOC106567216 coding downstream 63877 28481432 ~ 28483385 (+)
G385868 NA non-coding upstream 19859 28396537 ~ 28396746 (+)
G385864 NA non-coding upstream 27672 28388727 ~ 28388933 (+)
G385857 NA non-coding upstream 34716 28381657 ~ 28381889 (+)
G385856 NA non-coding upstream 35625 28380757 ~ 28380980 (+)
G385848 NA non-coding upstream 48711 28366757 ~ 28367894 (+)
G385884 NA non-coding downstream 6748 28424303 ~ 28424517 (+)
G385886 NA non-coding downstream 6965 28424520 ~ 28424894 (+)
G385885 NA non-coding downstream 13126 28430681 ~ 28432375 (+)
G385891 NA non-coding downstream 54514 28472069 ~ 28472287 (+)
G385171 LOC106566130 other upstream 511874 27904467 ~ 27904731 (+)
G385053 NA other upstream 709527 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 733212 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1752992 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1955909 26437517 ~ 26502284 (+)
spag8 LOC106566715 other downstream 508722 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1324245 29741800 ~ 29763439 (+)
G387516 NA other downstream 1479431 29896986 ~ 29898134 (+)
G388019 NA other downstream 1869396 30286951 ~ 30287824 (+)
G390184 NA other downstream 3542800 31960355 ~ 31960745 (+)

Expression


Co-expression Network