Gene
RNA
| Item | Value |
|---|---|
| gene id | G385884 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28424303 ~ 28424517 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU438298 | True | 215 | lncRNA | 0.46 | 1 | 28424303 | 28424517 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rgs7bpb | LOC106566593 | coding | upstream | 356 | 28418222 ~ 28423947 (+) |
| rnf180 | LOC106566588 | coding | upstream | 7895 | 28406724 ~ 28416408 (+) |
| ank1b | LOC106566514 | coding | upstream | 77385 | 28269837 ~ 28346918 (+) |
| LOC118964582 | NA | coding | upstream | 121195 | 28297723 ~ 28303108 (+) |
| LOC118964581 | NA | coding | upstream | 159968 | 28261777 ~ 28264335 (+) |
| ghr1 | ghr1 | coding | downstream | 14561 | 28439078 ~ 28463949 (+) |
| LOC110523547 | ccdc152 | coding | downstream | 39582 | 28464099 ~ 28467134 (+) |
| LOC110522905 | LOC106563371 | coding | downstream | 49030 | 28473547 ~ 28475595 (+) |
| LOC110523549 | LOC106567216 | coding | downstream | 56915 | 28481432 ~ 28483385 (+) |
| pip5k1ba | LOC106566653 | coding | downstream | 295760 | 28720277 ~ 28733042 (+) |
| G385868 | NA | non-coding | upstream | 27557 | 28396537 ~ 28396746 (+) |
| G385864 | NA | non-coding | upstream | 35370 | 28388727 ~ 28388933 (+) |
| G385857 | NA | non-coding | upstream | 42414 | 28381657 ~ 28381889 (+) |
| G385856 | NA | non-coding | upstream | 43323 | 28380757 ~ 28380980 (+) |
| G385848 | NA | non-coding | upstream | 56409 | 28366757 ~ 28367894 (+) |
| G385886 | NA | non-coding | downstream | 3 | 28424520 ~ 28424894 (+) |
| G385885 | NA | non-coding | downstream | 6164 | 28430681 ~ 28432375 (+) |
| G385891 | NA | non-coding | downstream | 47552 | 28472069 ~ 28472287 (+) |
| G385933 | NA | non-coding | downstream | 111822 | 28536339 ~ 28539057 (+) |
| G385805 | NA | other | upstream | 6748 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 519572 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 717225 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 740910 | 27675352 ~ 27719165 (+) |
| G383794 | LOC106566282 | other | upstream | 1760690 | 26661838 ~ 26663613 (+) |
| spag8 | LOC106566715 | other | downstream | 501760 | 28926263 ~ 28931410 (+) |
| tbx5a | LOC106566939 | other | downstream | 1317283 | 29741800 ~ 29763439 (+) |
| G387516 | NA | other | downstream | 1472469 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 1862434 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 3535838 | 31960355 ~ 31960745 (+) |
