G386017


Basic Information

Item Value
gene id G386017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28669715 ~ 28670050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438436
TCTAACGTttaaattccttgctcagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaggttgtagttattataggactatttccctctatacgatttgtatttcatatacctttgactattggatgttcttataggcactttagtattgccagtgtaacagtataacttctgtccctctcctcgcccctacctgtgctcgaaccagaaacacatcgacaacagccaccctcgaagcatcgttacccatcgctacaCAAAAgcagcggcccttgcagagcaagaggaatcactactccaagtctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438436 True 336 lncRNA 0.42 1 28669715 28670050

Neighbor

gene id symbol gene type direction distance location
LOC110523549 LOC106567216 coding upstream 186330 28481432 ~ 28483385 (+)
LOC110522905 LOC106563371 coding upstream 194177 28473547 ~ 28475595 (+)
LOC110523547 ccdc152 coding upstream 202581 28464099 ~ 28467134 (+)
ghr1 ghr1 coding upstream 205766 28439078 ~ 28463949 (+)
rgs7bpb LOC106566593 coding upstream 245768 28418222 ~ 28423947 (+)
pip5k1ba LOC106566653 coding downstream 50227 28720277 ~ 28733042 (+)
LOC110523554 LOC106566671 coding downstream 67411 28737461 ~ 28780731 (+)
LOC110523556 LOC106566689 coding downstream 126398 28796448 ~ 28804711 (+)
smc5 smc5 coding downstream 135176 28805226 ~ 28829428 (+)
zfand5b zfand5b coding downstream 159665 28829715 ~ 28837189 (+)
G386018 NA non-coding upstream 1878 28667460 ~ 28667837 (+)
G385973 NA non-coding upstream 10855 28658572 ~ 28658860 (+)
G385946 NA non-coding upstream 109103 28560247 ~ 28560612 (+)
G385933 NA non-coding upstream 130658 28536339 ~ 28539057 (+)
G386022 NA non-coding downstream 12700 28682750 ~ 28683207 (+)
G386024 NA non-coding downstream 14692 28684742 ~ 28685014 (+)
G386044 NA non-coding downstream 35128 28705178 ~ 28705512 (+)
G386057 NA non-coding downstream 48752 28718802 ~ 28719022 (+)
G386065 NA non-coding downstream 86460 28756510 ~ 28770567 (+)
G385805 NA other upstream 252160 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 764984 27904467 ~ 27904731 (+)
G385053 NA other upstream 962637 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 986322 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 2006102 26661838 ~ 26663613 (+)
spag8 LOC106566715 other downstream 256227 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1071750 29741800 ~ 29763439 (+)
G387516 NA other downstream 1226936 29896986 ~ 29898134 (+)
G388019 NA other downstream 1616901 30286951 ~ 30287824 (+)
G390184 NA other downstream 3290305 31960355 ~ 31960745 (+)

Expression


Co-expression Network