G386982


Basic Information

Item Value
gene id G386982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29400530 ~ 29400752 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439493
ataataacacacagaaacacgagccttaggtcattaatatggtcaaatcaaatccggaaactataatttcgaaaacaaaacatttattatttcaatgaaatacggaaccgttcggtattttgtctaacggatggcatccttAAGTCtcaatattgctgttacattgcacaaccttcaatgttatgtcataattatgtacaattctggcaaattaattacggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439493 True 223 lncRNA 0.33 1 29400530 29400752

Neighbor

gene id symbol gene type direction distance location
mtfp1 LOC106566934 coding upstream 88202 29304337 ~ 29312328 (+)
LOC110523578 LOC106566868 coding upstream 137889 29254638 ~ 29262641 (+)
LOC110523576 LOC106563296 coding upstream 212562 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 234020 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 265047 29133844 ~ 29135483 (+)
LOC110523583 LOC106566936 coding downstream 312176 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 341111 29741800 ~ 29763439 (+)
LOC110523590 rab14 coding downstream 458857 29859609 ~ 29902923 (+)
LOC110524747 LOC106567126 coding downstream 704541 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 732920 30133672 ~ 30217715 (+)
G386981 NA non-coding upstream 234 29400031 ~ 29400296 (+)
G386980 NA non-coding upstream 687 29399614 ~ 29399843 (+)
G386978 NA non-coding upstream 2444 29397652 ~ 29398086 (+)
G386976 NA non-coding upstream 9927 29390300 ~ 29390603 (+)
G386975 NA non-coding upstream 10415 29389838 ~ 29390115 (+)
G386986 NA non-coding downstream 8047 29408799 ~ 29409022 (+)
G386987 NA non-coding downstream 9183 29409935 ~ 29410157 (+)
G386990 NA non-coding downstream 12465 29413217 ~ 29413469 (+)
G386995 NA non-coding downstream 15717 29416469 ~ 29416702 (+)
G386998 NA non-coding downstream 18126 29418878 ~ 29419144 (+)
spag8 LOC106566715 other upstream 469599 28926263 ~ 28931410 (+)
G385805 NA other upstream 982975 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1495799 27904467 ~ 27904731 (+)
G385053 NA other upstream 1693452 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1717137 27675352 ~ 27719165 (+)
G387516 NA other downstream 496234 29896986 ~ 29898134 (+)
G388019 NA other downstream 886199 30286951 ~ 30287824 (+)
G390184 NA other downstream 2559603 31960355 ~ 31960745 (+)
G390393 NA other downstream 2819429 32220181 ~ 32220533 (+)

Expression


Co-expression Network