Gene
RNA
| Item | Value |
|---|---|
| gene id | G387405 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 29711303 ~ 29711709 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU439952 | True | 407 | lncRNA | 0.39 | 1 | 29711303 | 29711709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523581 | LOC106566935 | coding | upstream | 265123 | 29341278 ~ 29446180 (+) |
| mtfp1 | LOC106566934 | coding | upstream | 398975 | 29304337 ~ 29312328 (+) |
| LOC110523578 | LOC106566868 | coding | upstream | 448662 | 29254638 ~ 29262641 (+) |
| LOC110523576 | LOC106563296 | coding | upstream | 523335 | 29174319 ~ 29187968 (+) |
| LOC110523574 | LOC106566787 | coding | upstream | 544793 | 29140833 ~ 29166510 (+) |
| LOC110523583 | LOC106566936 | coding | downstream | 1219 | 29712928 ~ 30103090 (+) |
| tbx5a | LOC106566939 | coding | downstream | 30154 | 29741800 ~ 29763439 (+) |
| LOC110523590 | rab14 | coding | downstream | 147900 | 29859609 ~ 29902923 (+) |
| LOC110524747 | LOC106567126 | coding | downstream | 393584 | 30105293 ~ 30112442 (+) |
| LOC110524742 | LOC106567059 | coding | downstream | 421963 | 30133672 ~ 30217715 (+) |
| G387401 | NA | non-coding | upstream | 5180 | 29705884 ~ 29706123 (+) |
| G387399 | NA | non-coding | upstream | 7350 | 29703734 ~ 29703953 (+) |
| G387395 | NA | non-coding | upstream | 15610 | 29695449 ~ 29695693 (+) |
| G387387 | NA | non-coding | upstream | 23485 | 29687616 ~ 29687818 (+) |
| G387374 | NA | non-coding | upstream | 35456 | 29675578 ~ 29675847 (+) |
| G387406 | NA | non-coding | downstream | 55 | 29711764 ~ 29711963 (+) |
| G387484 | NA | non-coding | downstream | 119139 | 29830848 ~ 29831142 (+) |
| G387570 | NA | non-coding | downstream | 263670 | 29975379 ~ 29976702 (+) |
| G387556 | LOC106566971 | non-coding | downstream | 284769 | 29996478 ~ 30003512 (+) |
| spag8 | LOC106566715 | other | upstream | 780372 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 1293748 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 1806572 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 2004225 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 2027910 | 27675352 ~ 27719165 (+) |
| G387516 | NA | other | downstream | 185277 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 575242 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 2248646 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 2508472 | 32220181 ~ 32220533 (+) |
