G387657 (LOC106567126)


Basic Information

Item Value
gene id G387657
gene name LOC106567126
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 30122695 ~ 30123495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU440235
aaaaaaaggtagCTGCAAATAAAAACCTTAAACGATAACACCAGCTAGCAGTGAGTGTTCAGGTACGGTCCTACCTTTCAGAGCCTTATCATTGGTTTCCCCTGATGTCCTGCTGGCTGCAGGTCGGCTAAATGTGCTCCCCAAGGCTCTCTGCTCATTTTCCCTCTTCCGATCCGGCTGCCGTGACCCATAGTCgttgttgttgttgtagtagcgGGAGTGGGGGTGGTAGTGTCGGGCAGGGAAGCCCATGTGGGGGGTCTTGATGGACATGCCCATGGGTACAGGGCCCATGAGAGAGGACCGGGCCCCTGCAGCAAAGAACTGGGTGAACTGCTGCCCACTCACTGCTGCAAAGCCCTGCATGCTACCTGGAGTGCCAGAGACAGGAGAGATAGAGGTAGGAAGAAAGTGTGGGAGGAGATGAGCATGAGGAGAAAAAAATAATTGGTGGAAAAACTTTCAGCActggtgtaaagtatttaagtaaaaataccttaagtagtactttaaagtatctgtactttaccatttatatttttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440235 True 543 lncRNA 0.49 2 30122695 30123495

Neighbor

gene id symbol gene type direction distance location
LOC110524747 LOC106567126 coding upstream 14146 30105293 ~ 30112442 (+)
LOC110523590 rab14 coding upstream 219772 29859609 ~ 29902923 (+)
tbx5a LOC106566939 coding upstream 359256 29741800 ~ 29763439 (+)
LOC110523583 LOC106566936 coding upstream 400007 29712928 ~ 30103090 (+)
LOC110523581 LOC106566935 coding upstream 676515 29341278 ~ 29446180 (+)
LOC110524742 LOC106567059 coding downstream 10177 30133672 ~ 30217715 (+)
LOC110523600 LOC106567149 coding downstream 132878 30256373 ~ 30260305 (+)
rgs3a LOC106565973 coding downstream 216311 30339806 ~ 30495960 (+)
LOC110523597 LOC106565929 coding downstream 551441 30674936 ~ 30711660 (+)
LOC110522910 LOC106565903 coding downstream 618359 30741854 ~ 30856071 (+)
G387597 NA non-coding upstream 44767 30032701 ~ 30077928 (+)
G387556 LOC106566971 non-coding upstream 119183 29996478 ~ 30003512 (+)
G387570 NA non-coding upstream 145993 29975379 ~ 29976702 (+)
G387484 NA non-coding upstream 291553 29830848 ~ 29831142 (+)
G387678 NA non-coding downstream 45855 30169350 ~ 30169959 (+)
G387711 NA non-coding downstream 137417 30260912 ~ 30261118 (+)
G387712 NA non-coding downstream 137642 30261137 ~ 30261674 (+)
G388013 NA non-coding downstream 160332 30283827 ~ 30284092 (+)
G388017 NA non-coding downstream 162090 30285585 ~ 30285784 (+)
G387516 NA other upstream 224561 29896986 ~ 29898134 (+)
spag8 LOC106566715 other upstream 1191764 28926263 ~ 28931410 (+)
G385805 NA other upstream 1705140 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 2217964 27904467 ~ 27904731 (+)
G388019 NA other downstream 163456 30286951 ~ 30287824 (+)
G390184 NA other downstream 1836860 31960355 ~ 31960745 (+)
G390393 NA other downstream 2096686 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 3035331 33158826 ~ 33162980 (+)
G391805 NA other downstream 3237462 33360957 ~ 33361341 (+)

Expression


Co-expression Network