G388019


Basic Information

Item Value
gene id G388019
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 30286951 ~ 30287824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU440680
tctccacgcatcgcgctgacagaaacaaacatctttctggtaagaagaggggcgggggcgtatgcctcatggccaacgtgacatggtgtgatgaaagaaacatacaggaactcaaatccttctgttcacctgatttagaattcctcacaatcaaatgtagaccgcattatctaccaagggaattctcttcgattataatcacagccgtatatatccccccccaagcagacacatcgatggctctgaacgaactttatttaactctctgcaaactggaaacgatttatccggaggctgcattcattgtagctggggattttaacaaggctaatctgaaaacaagactccctaaattttatcagcatatcgattgcgcaaccaggggtggaaagaccttggatcattgttactctaacttccgcgacgcatataaggccctgccccgcccccctttcggaaaagctgaccacgactccattttgttgatccctgcctacagacagaaactaaaacaagaggctcccacgctgaggtctgtccaacgctggtccgaccaagctgactccacactccaagactgcttccatcacgtggactgggagatgtttcgtattgcgttagataacaacattgacgaatacgctgattcggtgtgcgagttcattagaacgtgcgttgaagatgtcgttcccatagcaatgattaaaacattccctaaccagaaaccgtggattgatggcagcattcgtgtgaaactgaaagcgcaaaccactgcttttaatcagggcaaggtgtctggtaacatgaccgaatacaaacagtgcagctattccctccgcaaggctatcaaacaagctaagcgccagtacagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440680 True 874 TUCP 0.47 1 30286951 30287824

Neighbor

gene id symbol gene type direction distance location
LOC110523600 LOC106567149 coding upstream 26646 30256373 ~ 30260305 (+)
LOC110524742 LOC106567059 coding upstream 69236 30133672 ~ 30217715 (+)
LOC110524747 LOC106567126 coding upstream 178402 30105293 ~ 30112442 (+)
LOC110523590 rab14 coding upstream 384028 29859609 ~ 29902923 (+)
tbx5a LOC106566939 coding upstream 523512 29741800 ~ 29763439 (+)
rgs3a LOC106565973 coding downstream 51982 30339806 ~ 30495960 (+)
LOC110523597 LOC106565929 coding downstream 387112 30674936 ~ 30711660 (+)
LOC110522910 LOC106565903 coding downstream 454030 30741854 ~ 30856071 (+)
LOC110522913 LOC106565915 coding downstream 678315 30966139 ~ 30975087 (+)
LOC110523608 NA coding downstream 1865084 32152908 ~ 32160417 (+)
G388017 NA non-coding upstream 1167 30285585 ~ 30285784 (+)
G388013 NA non-coding upstream 2859 30283827 ~ 30284092 (+)
G387712 NA non-coding upstream 25277 30261137 ~ 30261674 (+)
G387711 NA non-coding upstream 25833 30260912 ~ 30261118 (+)
G387655 NA non-coding upstream 101982 30113739 ~ 30184969 (+)
G388448 NA non-coding downstream 324415 30612239 ~ 30612506 (+)
G388472 NA non-coding downstream 339822 30627646 ~ 30628015 (+)
G388477 NA non-coding downstream 341528 30629352 ~ 30629649 (+)
G388479 NA non-coding downstream 342538 30630362 ~ 30635355 (+)
G387516 NA other upstream 388817 29896986 ~ 29898134 (+)
spag8 LOC106566715 other upstream 1356020 28926263 ~ 28931410 (+)
G385805 NA other upstream 1869396 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 2382220 27904467 ~ 27904731 (+)
G390184 NA other downstream 1672531 31960355 ~ 31960745 (+)
G390393 NA other downstream 1932357 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 2871002 33158826 ~ 33162980 (+)
G391805 NA other downstream 3073133 33360957 ~ 33361341 (+)
G392776 NA other downstream 3859650 34147474 ~ 34150795 (+)

Expression


Co-expression Network