G390372


Basic Information

Item Value
gene id G390372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 32194200 ~ 32194428 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU443159
attaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatactaattttccaccataatttgcaaataaattcattaaaaatcatacaatgtgattttcaggattttttttctcagtttgtctgtcatggttgaagtttacctatgatgaagattacaggtctctctcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443159 True 229 lncRNA 0.35 1 32194200 32194428

Neighbor

gene id symbol gene type direction distance location
LOC110523608 NA coding upstream 33783 32152908 ~ 32160417 (+)
LOC110522913 LOC106565915 coding upstream 1221857 30966139 ~ 30975087 (+)
LOC110522910 LOC106565903 coding upstream 1338602 30741854 ~ 30856071 (+)
LOC110523597 LOC106565929 coding upstream 1482540 30674936 ~ 30711660 (+)
rgs3a LOC106565973 coding upstream 1698240 30339806 ~ 30495960 (+)
lhx3 lhx3 coding downstream 63500 32257928 ~ 32270782 (+)
LOC110523612 LOC106565885 coding downstream 139074 32333502 ~ 32336514 (+)
LOC110523614 LOC106565718 coding downstream 146448 32340876 ~ 32390222 (+)
nup214 LOC106565702 coding downstream 210070 32404498 ~ 32485105 (+)
LOC110523616 LOC106565683 coding downstream 330153 32524581 ~ 32531600 (+)
G390369 NA non-coding upstream 2481 32191318 ~ 32191719 (+)
G390361 NA non-coding upstream 17683 32176306 ~ 32176517 (+)
G390283 NA non-coding upstream 102711 32086350 ~ 32091489 (+)
G390291 NA non-coding upstream 151831 32042108 ~ 32042369 (+)
G390374 NA non-coding downstream 2203 32196631 ~ 32197569 (+)
G390380 NA non-coding downstream 8181 32202609 ~ 32203613 (+)
G390381 NA non-coding downstream 9397 32203825 ~ 32204377 (+)
G390382 LOC107744057 non-coding downstream 11822 32206250 ~ 32206667 (+)
G390387 NA non-coding downstream 18191 32212619 ~ 32212818 (+)
G390184 NA other upstream 233455 31960355 ~ 31960745 (+)
G388019 NA other upstream 1906376 30286951 ~ 30287824 (+)
G387516 NA other upstream 2296066 29896986 ~ 29898134 (+)
tbx5a LOC106566939 other upstream 2448006 29741800 ~ 29763439 (+)
spag8 LOC106566715 other upstream 3263269 28926263 ~ 28931410 (+)
G390393 NA other downstream 25753 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 964398 33158826 ~ 33162980 (+)
G391805 NA other downstream 1166529 33360957 ~ 33361341 (+)
G392776 NA other downstream 1953046 34147474 ~ 34150795 (+)
G394882 NA other downstream 3710684 35905112 ~ 35905781 (+)

Expression


Co-expression Network