G391830


Basic Information

Item Value
gene id G391830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 33407290 ~ 33407623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU444769
gttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacattgattTTAGCATTGGCAAATTGCCTTAGTCTCGTAGTAATAAACGGTTAAAACGTCGGTAGATTCGTAAACTTTTAGCAAATCTGAAATGTATTGGAATAAATCACCAAACTATATAACCAGCTATCagtaaatgtagctagctacctgacaGGAGTGCTACCTAGATACGTTAGCTTATTAGGTACatcaatcaaatcacattttatttgtcacacgagccgaatacaacaggtgtaggtagacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444769 True 334 lncRNA 0.38 1 33407290 33407623

Neighbor

gene id symbol gene type direction distance location
tsc1b LOC106565454 coding upstream 148215 33226370 ~ 33259075 (+)
LOC110523632 LOC106565566 coding upstream 443321 32909966 ~ 32963969 (+)
LOC110523631 LOC106565876 coding upstream 503527 32900863 ~ 32903763 (+)
LOC110522915 NA coding upstream 510480 32885656 ~ 32896810 (+)
LOC110523629 LOC107720969 coding upstream 523191 32762181 ~ 32884099 (+)
LOC110523644 LOC106565434 coding downstream 9795 33417418 ~ 33446506 (+)
LOC110523645 LOC106565424 coding downstream 82500 33490123 ~ 33492398 (+)
LOC100136128 LOC106565394 coding downstream 232865 33640488 ~ 33799714 (+)
LOC110523646 LOC106565369 coding downstream 423083 33830706 ~ 33844121 (+)
LOC110523649 LOC106565324 coding downstream 439150 33846773 ~ 34088984 (+)
G391818 NA non-coding upstream 21454 33385623 ~ 33385836 (+)
G391801 NA non-coding upstream 50106 33356843 ~ 33357184 (+)
G391772 NA non-coding upstream 69247 33337754 ~ 33338043 (+)
G391569 NA non-coding upstream 113027 33293692 ~ 33294263 (+)
G391525 NA non-coding upstream 207723 33193270 ~ 33199567 (+)
G391912 NA non-coding downstream 154818 33562441 ~ 33562730 (+)
G391934 NA non-coding downstream 184337 33591960 ~ 33592305 (+)
G391942 NA non-coding downstream 193938 33601561 ~ 33603692 (+)
G391902 NA non-coding downstream 235598 33643221 ~ 33643546 (+)
G391805 NA other upstream 45949 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 244310 33158826 ~ 33162980 (+)
G390393 NA other upstream 1186757 32220181 ~ 32220533 (+)
G390184 NA other upstream 1446545 31960355 ~ 31960745 (+)
G388019 NA other upstream 3119466 30286951 ~ 30287824 (+)
G392776 NA other downstream 739851 34147474 ~ 34150795 (+)
G394882 NA other downstream 2497489 35905112 ~ 35905781 (+)
G394910 NA other downstream 2559314 35966937 ~ 36004829 (+)
you2 you2 other downstream 2625637 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2795278 36202901 ~ 36206616 (+)

Expression


Co-expression Network