G393726


Basic Information

Item Value
gene id G393726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34856776 ~ 34857092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU446792
agacctgctgttttcaactctctagagatagcaagagcggtagagatactctgaatgaccGGCTATGAaatgccaactgacatttactcctgaggtgctgacctgttgcaccctcgacaaccactgtgattattattatttgaccctgctggtcatctatgaacattggaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcattgcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446792 True 317 lncRNA 0.48 1 34856776 34857092

Neighbor

gene id symbol gene type direction distance location
adra1ab LOC106565247 coding upstream 407984 34436786 ~ 34448792 (+)
si:ch211-127i16.2 LOC106565287 coding upstream 709450 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 767792 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 823936 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 1012655 33830706 ~ 33844121 (+)
LOC110523660 LOC106565209 coding downstream 229734 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 497006 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 610848 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 625136 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 689453 35546545 ~ 35595618 (+)
G393367 NA non-coding upstream 71286 34782392 ~ 34785490 (+)
G393248 NA non-coding upstream 177239 34611962 ~ 34679537 (+)
G393208 NA non-coding upstream 244000 34550941 ~ 34612776 (+)
G393185 NA non-coding upstream 339319 34515115 ~ 34517457 (+)
G393117 LOC106565272 non-coding upstream 434987 34413404 ~ 34421789 (+)
G393859 NA non-coding downstream 97578 34954670 ~ 34955152 (+)
G394057 NA non-coding downstream 223411 35080503 ~ 35080815 (+)
G394083 NA non-coding downstream 246609 35103701 ~ 35103917 (+)
G394131 NA non-coding downstream 311965 35169057 ~ 35169286 (+)
G394137 NA non-coding downstream 322412 35179504 ~ 35179725 (+)
G392776 NA other upstream 708075 34147474 ~ 34150795 (+)
G391805 NA other upstream 1495435 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1693796 33158826 ~ 33162980 (+)
G390393 NA other upstream 2636243 32220181 ~ 32220533 (+)
G390184 NA other upstream 2896031 31960355 ~ 31960745 (+)
G394882 NA other downstream 1048020 35905112 ~ 35905781 (+)
G394910 NA other downstream 1109845 35966937 ~ 36004829 (+)
you2 you2 other downstream 1176168 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1345809 36202901 ~ 36206616 (+)
G395034 NA other downstream 1423208 36280300 ~ 36301290 (+)

Expression


Co-expression Network