G394870


Basic Information

Item Value
gene id G394870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35878968 ~ 35885833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448033
gctgttgggggtactcaagaactggagttgggaaccactgtattAGAACATTTCTCAGAGAGGGATTAATGTGTCAGTGGGCATGGTTTACCTTCATCCGGGTCTGAATGGCAGTGATGTCTGGGCACTCTCTACAGCTACTGTCCAGGTGCCTAAGGAGAGAGGCCAGTCAGATTGACAACATCATGCACAGCTCTGTCAAGTGAAATAATAGGCGAGTGTCACTCATAGAACAAAATAAATGCCCACTCACTTGTACAACTCAGCTAAAAATATATCAAGATGCTTCAGCTCTTCAAAAAGATCTTGAGGAAAAAGAGACACTCccatgttagctccccattAACATTATATGGGGAATATTTAAACAATGCTATATAACTGAATGTATAGAATTACAACAATATACACAATTCTACAAGCTGGCATAACTCTAAATATATACCTCTGGATTAGAACATGAATCTAATTGCGAGGTGTGTTAAAGGATATTTTCTATACACACCATGTGATGATGAGTGAAAGGTTCTTACCGTGTCCACTTGTCTCAGCACAGTTCCCTCGGCAAAGAACAGTGGCTTCCTGGTATCCACGACGACAAGGTCAAAGAAGGCGCGCCACGGTTTTTTGGGGTACTTAAGAAAAAATATATTGAAATGTTGATTAAAATGAATGGTAATTTGTTCCCCAAAACCCTTTTCCTTCATTTGAAACTGGAGACACCTAGACTAACCTTGGCACCTGGTGGAGTTTCAAGCAAGTATTTCATGATAGCCTAGAAAAAAGAACAAAGACACATCCTTTGTATAAAAGTgaatataatagaatgtattGAATAGAATGGACATCATGTATTGTATAGAATGGACATCATGTACCATGCAACATTAACAACTGACCTCTGTGTAGTTGTAATCACTGTTGGTCGCCAGGAACACTTTGGCCACCTCCTTAATACGAGTCAGGAGAACAGGCAAGTTTAGCTAtcgagaagaagagaaagggagagggtcaATTCCTCTGGATAGAGAAAGTTTAGGTAATCTCAGAGACTTGTTGAACGTCACTAATTAACTGAGGTATCATCTCATAAATTATGTTCCAAAACACTTAGTCAATATACTGTATCCAGAAAAGGTATCCAATATGGAACAGCAATTAAGGGAGGTTTCAACGTTATTTTCACTCACGTCTCTGACGACATATTTATCCAAATTCCTCAGAGTGCTTTCCTTCAGACTGCCCTATATGACACAATGGAGAGAGTCAGTCTACACAAAGGCACAGACAGTAATGTTTCATAATGTGTGAGTACGTGTGTCGGGATGGGGTGGCGTATGTACTGTATAATGCTGACCGTATCATGAACATAGTCCATTGCATCTCGAACATCCTGGAACATGCTTCTGAAGGACATGAACAAGTCACCATGTTTGAAGCCTTTCTGGcagctaaaaaaaaatatttaaaaaaaagtacagAAACTACAGTCACATTACTCACTTATGTTTTATGATTTACTATTCTCACAGCTGTGGAGAAAAAGAGTCGGCaacgagaagagagaagaggacaatAGAGTCCACTCACTTTTCGTATCTGCTGCATCTGGTGAAGAGGTCCACAAGGCAACCATCCAGATACGTCTCTGTGGGAGGAGCAGGAGGGCGTTACAAAGCCATTCTATTTTACTTTATTTGCAGCATGATTGTACAGAACTAGACAAAATAACACTGTTGTTGCAACCTGAAAGGTTGAAGAGAGTATTGAGGATATAGAAGCGGTCAGTGTTGCCTCTCTGAATGAAGTTGTTGGGGTAGTAGTCTTGGATCTTGTCCCTGTAGAGAAGGAAAGTATGTGTACAACTAGCAAATTAAGGAGTAGCCACAAGTGCATATAAAGACATGTAAACATGATAAAAACATGCATACTGTGTAGTAGAACCTCATTAAGTAAGCTGGTCTGACAACCTCCCCAATAACACACCAAACAGCTACTATTGGAGCATTTCTGGATGATGAGTCATTCAGAGAGCACCCACTGAGCCAGAAGATAACAAGATAACAGACAGAGTGCACGTATCCCACTAGCACGATCAACGTCACAAGACCTCTCTTTTTGGAGTCTCTTGACCATGACGTTCAGCTAGAGCTGGAGAAACATCCACTGGCCTTCTCCACTGAAGCAACACTGTAGTCTGCCTTTCTGTAAGAGTATGAGGCAAGGATCCAGTGGCGATTGAGTGGATTTGAACTGGAACAGGAGCCTCTTGATAGCTCAGCTGCTGGTAGGGGATCCCAAAGACATCTAAATCCTGTTATATGAATGGAAGATGGGCACTATGTACATGTCCTGCTAAAGTATATTCAATGTCGTCTTTcatgataaaaaaaacaaaatacacaTAGTCCTACATAAGACTCACAATAACCCAAAGATTAACTCATAAGGAACTCACGTAATCATGCAATaacacacatgtaaacacataCAGACATTCATTCGCAAATCCCACGGCACCAGGTGGTGGATATAAATATACGTTTTCATATTTGTGAGCTAGTTACATCACCATTGTAATTGATGAATAAAGAATTCCAAATAGTGCTGCTATATCTACACCCAACTAATGTTCAGAAAAAAAACTTTTAACATTCCTGCACACCTTGTGGAGTATCATGTTAGCTGTGAAACAAGTTTTAGGGGATATTTTGCATTCATTTCTCAGTCCTCCATGAAACAACCAGGAACATGGGGGCTGTTTTATGTTGTAAGCTGAATATATTGGCAGTATGTAGGCCTACTGAGACAGATGCTCACAGTTGGATCTGACCAAGGTCAGGATCAGGCTCCCTTGGTCTCCAACATCCTCAGTTCTCGGGTAGAACTCCATCTCCTGTACCCTCAAGATAAAAACAACTCCTTCATACAGCTGCAATATATAGCCTACACACAGGTAGTGTATTCTGCTTCTCCTATGAAATGTAACCAGCGGAGAATTACAAAATTCAGTGGATTCAGATTGATAAGATGTGTATAATATATCAGTCTTTCAGAAAATATGGTATTTTAAATTGGACATATGAAAATAGTCACATATTGACCTTGTGGTTTTCTGTGACCATGCTCTTTTGATGTTTGACAGAAGAACTGTTTCACCTTGATGACCCCCTGTGTAGACATGCcgatttgctgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgtgtcattCCCCTGTTCCCCTGCTTAGAAGACTTTGCAAAGTGGTTGTGCAGATGTGCCCTCAGTGACCGTGTTGACCCAAGGACATCCTGTTACAGAATTACAAACAGTAtactcacaaaaacacacacacacacacacacacacacacacacacacacacacacaccagtcttgTATAACCAACTTTGTGGGGgtcacacaattcagtcccattcaaaatcctattttccctaacccttatctgaaaacctaaccttaaccctaaacctaactctagctcctaaccctaacactaattctaaccctaaaccctctagaaatagcatttgaccttgtggggactaataCAATGTCCCCAGTTGTATAAtgaaacacatccacacacacaaactattgtATTTCCTGTGATGTATCACTGACCTTTTTAGAAAGGTGAAACCATGACTgcacagcagaatgtttccattggaGTCCACCTTCAGCAAGTTCCCATACATTGTGTCAAACACCAGGCCgctaaggagggaggagagattgggatgaaaaggaggaagagagagccaGGGGTGAATATGGTTATGCAGAGACAagcagagagaggaatggatggGAGAGGGATAGATGATATCTTTTAGATTTGTggctgctcttgatagtatcagcAGGTTACTTTTTATTTCTGCTCTATTTTGACCAAtcttgttattctactgttaccAGGCCTTTGGGGTAACTATCCCTGCAGGAGGTCTCTATCTGCTGATGAAGTGATAAAATGTCAGATGTTTCTCCAGCATAGTGTCCCCCTGGGGCAAGGATACAGAAAATAGAATGCACAGAGCAACAAATGACTTGAAAAAGAATGGTTAGGGGTCATTTCATAAGTTCAGTCCATAAAGAGCCCCATCCTAACTAACCATGCTTTGCGTCAACACAATGCTAAGGAGCTCTATTTCATGTAGAACATAAGGAAAAAAACATTTGTGAGTAAAGGGTTATGTTATGTATTACCAAACTGATCATGTAAAAATAAACAGTATGCAAATGTGTGTGGGATCAACAGGAAGAGAGAACTCACCGTGTGGGGAAGGTAGGGTCGTAGGTGTAATGCAGTAGCTCATGGGGATAGCCTATAGACACCAGCCTGTCTCTGAGCAGCTCAAAGCCCAGGTCCTCGTAGTCAGGAGACttgtac

Function

NR:

description
cytosolic purine 5'-nucleotidase-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448033 True 4437 lncRNA 0.41 2 35878968 35885833

Neighbor

gene id symbol gene type direction distance location
sppl3 LOC106565002 coding upstream 16342 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 211778 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 227965 35639728 ~ 35651003 (+)
atp8b5b LOC106565083 coding upstream 258420 35602601 ~ 35620548 (+)
unc13bb LOC106565090 coding upstream 283350 35546545 ~ 35595618 (+)
kcnn2 LOC106564970 coding downstream 44281 35930114 ~ 35960310 (+)
drg1 drg1 coding downstream 77368 35963201 ~ 35966744 (+)
slc20a1b LOC106564912 coding downstream 120373 36006206 ~ 36019354 (+)
you2 you2 coding downstream 147428 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 156685 36042518 ~ 36056035 (+)
G394869 NA non-coding upstream 1153 35873604 ~ 35877815 (+)
G394871 NA non-coding upstream 5696 35872855 ~ 35873272 (+)
G394868 NA non-coding upstream 12713 35865811 ~ 35866255 (+)
G394867 NA non-coding upstream 13643 35865052 ~ 35865325 (+)
G394862 NA non-coding upstream 21155 35857592 ~ 35857813 (+)
G394879 NA non-coding downstream 15375 35901208 ~ 35901430 (+)
G394881 NA non-coding downstream 16677 35902510 ~ 35902727 (+)
G394883 NA non-coding downstream 20178 35906011 ~ 35906218 (+)
G394885 NA non-coding downstream 22476 35908309 ~ 35918853 (+)
G394904 NA non-coding downstream 57503 35943336 ~ 36035345 (+)
G392776 NA other upstream 1730267 34147474 ~ 34150795 (+)
G391805 NA other upstream 2517627 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2715988 33158826 ~ 33162980 (+)
G390393 NA other upstream 3658435 32220181 ~ 32220533 (+)
G390184 NA other upstream 3918223 31960355 ~ 31960745 (+)
G394882 NA other downstream 19279 35905112 ~ 35905781 (+)
G394910 NA other downstream 81104 35966937 ~ 36004829 (+)
G395005 LOC106564805 other downstream 317068 36202901 ~ 36206616 (+)
G395034 NA other downstream 394467 36280300 ~ 36301290 (+)

Expression


Co-expression Network