G394883


Basic Information

Item Value
gene id G394883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35906011 ~ 35906218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448047
agacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgttttgttaaaaaagtttgaaatatccaataaatgttgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448047 True 208 lncRNA 0.35 1 35906011 35906218

Neighbor

gene id symbol gene type direction distance location
sppl3 LOC106565002 coding upstream 43385 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 238821 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 255008 35639728 ~ 35651003 (+)
atp8b5b LOC106565083 coding upstream 285463 35602601 ~ 35620548 (+)
unc13bb LOC106565090 coding upstream 310393 35546545 ~ 35595618 (+)
kcnn2 LOC106564970 coding downstream 23896 35930114 ~ 35960310 (+)
drg1 drg1 coding downstream 56983 35963201 ~ 35966744 (+)
slc20a1b LOC106564912 coding downstream 99988 36006206 ~ 36019354 (+)
you2 you2 coding downstream 127043 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 136300 36042518 ~ 36056035 (+)
G394881 NA non-coding upstream 3284 35902510 ~ 35902727 (+)
G394879 NA non-coding upstream 4581 35901208 ~ 35901430 (+)
G394870 NA non-coding upstream 20178 35878968 ~ 35885833 (+)
G394869 NA non-coding upstream 28196 35873604 ~ 35877815 (+)
G394871 NA non-coding upstream 32739 35872855 ~ 35873272 (+)
G394885 NA non-coding downstream 2091 35908309 ~ 35918853 (+)
G394904 NA non-coding downstream 37118 35943336 ~ 36035345 (+)
G394923 NA non-coding downstream 71638 35977856 ~ 35983731 (+)
G394958 NA non-coding downstream 193155 36099373 ~ 36108885 (+)
G394970 LOC106563191 non-coding downstream 214088 36120306 ~ 36121931 (+)
G394882 NA other upstream 230 35905112 ~ 35905781 (+)
G392776 NA other upstream 1757310 34147474 ~ 34150795 (+)
G391805 NA other upstream 2544670 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2743031 33158826 ~ 33162980 (+)
G390393 NA other upstream 3685478 32220181 ~ 32220533 (+)
G394910 NA other downstream 60719 35966937 ~ 36004829 (+)
G395005 LOC106564805 other downstream 296683 36202901 ~ 36206616 (+)
G395034 NA other downstream 374082 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 1058866 36965084 ~ 36965652 (+)

Expression


Co-expression Network