G394923


Basic Information

Item Value
gene id G394923
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35977856 ~ 35983731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448093
CTGATTTGTTACTCCATTTCAACATGGCAACTAACTTATTTCCTGGTTTCATAGATTTTCCTGTTCTTCTCAATTTCTTTTACACAATTTCTAAGGAATCAACTTCTGGAAATCATACACAAGGTGTTCAATTGCATGTTGAAAAAGAGATTTGGTTTATATAACACACCACTGTGGCCTACGGGAGGTGACATAGTTGTCTAGAAAGACAAGTGTTACAATCACAAGGTGGACATTCTCAAAACATTGCATACAGTAGTATTTCAATATGGAAACCGAAGTTTCTTATGCTCAGCATACAGTAGCTCTACAACTGACCATCTCAAAACAAAAAGCTCAATTAGAGGCCATTTCCTCTCACAACATTTCAAACAGTTATATACTGCTAACTGAACAGTTTTTTCCCCAGACAGAAAACAAGTGTGTTTATCACAAAGGTAAGAGTAGGCAAACGATCTTCAGACTTCATGAGAGTAAGTTActttAAAGGGATGATTCGGGATTTTGGAAATAAGTCCATTTATCTACTTCCCTAGAgccagatgaacttgtggataccattttaatttatgtgtccagtatgaaggaagttagtttGCTAGCAAATGCTGACGCTAACTAGCAtcagcacaatgactGGAATTAAACAAAATTACCCTTACCATAGTTCAATAGCAACTTttaatcagtggtgtaaagtacttaagtaaaaatacttttacttcactacattcttaaaagaacatattgtactttttaccccatatattttccctgacacccaaaagatctcgttacatttggaatgcttagcagaacaggacAATGGTCCAATTCAAGCACTTATCAAGAGGTCATCCTACTtcttctgatctggcggactcactaaacacatgcttattTTGTAAACAAtgtcagtgttggagtgttcccctggctataaATTAAAACAAGAAATGGTGTCGCCTGATTTGCTTAATATTGAATTTGAAATTATTAATTCTTTCAcgtttgatatttaagtatatttaagaaattacatttacttttgatactgaagtatatttaaaaaccaaatacttttactcaaatagtattttactgggtgactttcacgagtcattttctattaaggtatttttactcaagtatgacaatttggtaAATTATCCACCACTGTTTTTAATGCACTTTTACATTTCTAACTGAGTAATGGTGAACTACCAACAATCTGTTTCATGGAACTGCAGTCACGCATGTACTGTATACTGGAACCATAAATTCATGAAACTTTCACTGAAAACGACCCCTGTTTTAACCAATATCAGcaacacagaaaaaaaaaaaatcacacagaAACGGGTGTTAATTCAAATTGTACTAGATTGTCAGGCTGTAAATAGAAAAGTCACATGTTGTGTTAATCTATCCCACAGAGCACACATTCATGCCACTTCGTCCACCAGAAGGAACTAGGTAATATATCAGActgggaaaaaaaacattaaatatattagacatatacacacacacacaaggatgcAAAGGGCACATGATGTTACTAAACACGTGCCTTCCAAAGCTCATCAGTAATAGAAAAAAAGTGTTGCACTACTATTAGTAAGGGCACTTTCACTGTGAATGTACAGTAACAGCTGAGCAAACACAAACATCTTCCTCTGTAGTGCAAACTATCAAGCAGTCTGTCTTAATGATGCCTGTTCCATTACTTTGAACTTTGTACTCAGGACAAAGTACAGTTATTCAGTCACAGTCATGGgggcaacaggtagcctagcagttaagagtgtaggaccagtaaccaaaacgtagctggttcaaatcccagggcAGACTAGGTGAAAAACATCTGTCCAAGTGACCTTGAGCAAGTCATTTAACCCTCATtgttcctgtaagtcaATCCCATTGGAAAGCAGATAGTTAGGTGGCACAGGAACACATGCTTATTTTTCATAGAATTTTTGGATCAGGGCATAAAACATGGACGAGTGGAGGGGAACTGCAATGCTTGTAAAACAAAAACCAGCAAGAGCATTTGCCCCATAGAGGATTTTGCAGTTGCCATAAGACACCTTGGACaggaagacactggtaatcttcAGAAGGCTGTTAGAGGTGACCTGGCAGTTTAAAAAACAGACAAGGCGTGACAGACAAAGAAGTGAGAAACCTCAGTTCTGCAGACAAAAACATCACTAATCTCATAAACGTGAAAAAGATACCACTAGATCCCTTAAATCCACTCATCTGTTGAAGTCAATGTGCCAGGGAATTCAGCTAAAAAGCATGTTCCTTGAGTTCCTGGTATCACAGCgtttttatttataaatgttcTCCTTTCTCGGTTGTATAAACAAACTATGCATGCATGCATTTAGCTAAGCCTCCACAGCGAGCTATTTCAGTGCGGATATGACCAAATAAGGAACACAAACAAGGTGGCTGGAAGAAACTAGTAGacatggtggatggagtgagagacaATGCTTTGGCAACATCTCTATAGGGGTAATATTTTTGGTGCAGTCTCGCTAGTTGGTGTAGCAGCTAGTTAACAAAAGGAGGCATGATGGACACCTCTCCCCTCAGGATGTTGGCTGTCTAGCACTATTGTTTCAAGGCAGAAAGCTCCAATGGCAATTCTCCTGGCAGAAAAAGAGAAGTCTTTCCTCCAAAGGGTTCAAGGGCTCTTGTTGGTACTGTTTAAGCTTCTCATGACAATTATGTTATCAATATGGCTGTGACTATTATAACCACTCAAATAGCAACAGTATAGCACAAGTACGGCATATCTTCAATGTATGTATATTCCAGCTTAATTTGATATCCCATCACCCCTTGTGTCCAAAAGCCTGTGTTTTGAAGGTTGTTGTATGCGAGCAGATGCAGGTTACTCTCCCCaactctgcaaaaaaaaaaaaaagtcccttAGGCGTAGATCTGCCCAGGGTGCGTGTTGTCCCCAAGCCGGTCCTGGCTGGGCTGGTGCTTGGTGTCGTTGGACTTCACGGCGCTGGCATAATCATAGATCCCTACCTCCAGGTTCTTAGCCTTCAGGGCTGCAGTATGCAGTTTCTCCAGAAAGTCAGGCAT

Function

NR:

description
stAR-related lipid transfer protein 7, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448093 True 3117 lncRNA 0.39 5 35977856 35983731

Neighbor

gene id symbol gene type direction distance location
drg1 drg1 coding upstream 11112 35963201 ~ 35966744 (+)
kcnn2 LOC106564970 coding upstream 17546 35930114 ~ 35960310 (+)
sppl3 LOC106565002 coding upstream 115230 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 310666 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 326853 35639728 ~ 35651003 (+)
slc20a1b LOC106564912 coding downstream 22475 36006206 ~ 36019354 (+)
you2 you2 coding downstream 49530 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 58787 36042518 ~ 36056035 (+)
LOC110523692 LOC106564846 coding downstream 101393 36085124 ~ 36120105 (+)
LOC110523704 LOC100136432 coding downstream 387635 36371366 ~ 36376388 (+)
G394885 NA non-coding upstream 59003 35908309 ~ 35918853 (+)
G394883 NA non-coding upstream 71638 35906011 ~ 35906218 (+)
G394881 NA non-coding upstream 75129 35902510 ~ 35902727 (+)
G394879 NA non-coding upstream 76426 35901208 ~ 35901430 (+)
G394870 NA non-coding upstream 92023 35878968 ~ 35885833 (+)
G394958 NA non-coding downstream 115642 36099373 ~ 36108885 (+)
G394970 LOC106563191 non-coding downstream 136575 36120306 ~ 36121931 (+)
G395041 nfkbil1 non-coding downstream 276420 36260151 ~ 36261227 (+)
G395035 NA non-coding downstream 299000 36282731 ~ 36288452 (+)
G395062 NA non-coding downstream 318719 36302450 ~ 36302649 (+)
G394882 NA other upstream 72075 35905112 ~ 35905781 (+)
G392776 NA other upstream 1829155 34147474 ~ 34150795 (+)
G391805 NA other upstream 2616515 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2814876 33158826 ~ 33162980 (+)
G390393 NA other upstream 3757323 32220181 ~ 32220533 (+)
G395005 LOC106564805 other downstream 219170 36202901 ~ 36206616 (+)
G395034 NA other downstream 296569 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 981353 36965084 ~ 36965652 (+)
m17 m17 other downstream 1425470 37409195 ~ 37411565 (+)

Expression


Co-expression Network