XLOC_002333 (BX000451.1)


Basic Information

Item Value
gene id XLOC_002333
gene name BX000451.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 38488708 ~ 38488829 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004438
TTTTGTAAAAGcatgcagctagctctctgcaactctcacatggtcgcccactgaagcgaAGCAGGACTGCGCtcggttagtacctggatgggagaccacatgggaaagctaggttgtagaga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000085581

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004438 True 122 rRNA 0.52 1 38488708 38488829

Neighbor

gene id symbol gene type direction distance location
XLOC_002332 NA coding upstream 55499 38432338 ~ 38433209 (+)
XLOC_002331 samsn1b coding upstream 60614 38417512 ~ 38428094 (+)
XLOC_002330 NA coding upstream 453873 38025045 ~ 38034835 (+)
XLOC_002329 wscd1b coding upstream 480338 37981471 ~ 38008370 (+)
XLOC_002328 bhlha9 coding upstream 560583 37927100 ~ 37928125 (+)
XLOC_002334 serpinh1a coding downstream 23441 38512270 ~ 38521710 (+)
XLOC_002335 acer3 coding downstream 37667 38526496 ~ 38544426 (+)
XLOC_002336 BX000451.4 coding downstream 59260 38548089 ~ 38548205 (+)
XLOC_002337 LO018336.1 coding downstream 71203 38560032 ~ 38586660 (+)
XLOC_002338 mmp13a coding downstream 104816 38593645 ~ 38602561 (+)
XLOC_002327 NA non-coding upstream 599147 37865419 ~ 37889561 (+)
XLOC_002325 NA non-coding upstream 1010152 37478245 ~ 37478556 (+)
XLOC_002321 CT027794.1 non-coding upstream 1340924 37147669 ~ 37147784 (+)
XLOC_002342 CU896636.1 non-coding downstream 194837 38683666 ~ 38683780 (+)
XLOC_002344 CABZ01051877.1 non-coding downstream 260437 38749266 ~ 38760444 (+)
XLOC_002346 NA non-coding downstream 595183 39084012 ~ 39087853 (+)
XLOC_002354 NA non-coding downstream 840473 39329302 ~ 39393816 (+)

Expression


Co-expression Network