XLOC_023430 (CR352265.1)


Basic Information

Item Value
gene id XLOC_023430
gene name CR352265.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 21813127 ~ 21819010 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046344
TCATATGCAGTTTCAAAAGGATGCTCCCCCTCCTCCTTCAAATGTGCCAGTGGAAAGTGCTTAAATAAGATGAATCCAGAGTGTGACGGCATCAAAGATTGCAAAGACGGTTCTGATGAGTTACGTTGTGGTTGTGGCACGAGGCCCAGGAAGCGGGCGAAGATTGTGGGTGGCACAGATGCGCAGGCAGGCTCATGGCCGTGGCAGGTCAGCCTTCAGATGGAGCGGTATGGTCATGTGTGTGGAGCTTCTCTGGTGGCCAGTCGCTGGCTCGTGTCTGCTGCTCACTGCTTTCAGGACTCTGATGCCATCAAGTACTCTGATGCGCGCTCGTGGAGGGCCTACATGGGAATGCGAGTGATGAACTCAGTCAGTAACGCAGCAGCGACCAGACAAATCCGCCGCATCGTCCTGCATTCGCAATACGATCAGTTTACCTCAGACTATGACATTGCCCTGCTGGAACTGAGCGCTCCAGTGTTTTTCAATGAGCTGGTCCAGCCGGTCTGTGTACCGGCCCCATCCCACGTCTTCACCTCCGGAACCAGCTGCTTCGTCACTGGATGGGGAGTCCTGACTGAAGAAGGAGAACTAGCCACATTGCTGCAGGAAGCCACGGTTAACATCATCAATCAcaacacttgcaataaaatgtacgATGATGCGGTCACTCCCAGAATGCTTTGCGCCGGAAACATTCAGGGAGGAGTGGACGCTTGTCAGGGAGACTCCGGAGGGCCTTTAGTGTGTCTGGAACGGGGCCGCAGGTGGTTTCTAGCAGGCATCGTGAGTTGGGGTGAGGGCTGCGCTCGACAGAATCGGCCCGGAGTTTACACGCGTGTCATTAAGTTCACAGACTGGATTCACCAGCAGACGAAAGGCCAGGTGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000062758

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046344 True 891 mRNA 0.54 5 21813127 21819010

Neighbor

gene id symbol gene type direction distance location
XLOC_023429 flt1 coding downstream 4308 21750810 ~ 21808819 (-)
XLOC_023428 flt3 coding downstream 99244 21691939 ~ 21713883 (-)
XLOC_023427 urad coding downstream 123981 21687276 ~ 21689146 (-)
XLOC_023426 lnx2a coding downstream 138131 21646317 ~ 21674996 (-)
XLOC_023425 AL929009.3 coding downstream 175944 21603588 ~ 21637183 (-)
XLOC_023431 CR352265.3 coding upstream 22228 21841238 ~ 21847945 (-)
XLOC_023432 spata13 coding upstream 44925 21863935 ~ 21903588 (-)
XLOC_023433 c1qtnf9 coding upstream 86707 21905717 ~ 21914276 (-)
XLOC_023434 tagln3b coding upstream 98002 21917012 ~ 21934571 (-)
XLOC_023435 acot9.2 coding upstream 119731 21938741 ~ 21952164 (-)
XLOC_023665 dre-mir-735 misc upstream 16358951 38177961 ~ 38178027 (-)
XLOC_023407 NA non-coding downstream 1281314 20450027 ~ 20531813 (-)
XLOC_023401 BX247944.1 non-coding downstream 1625697 20187316 ~ 20187430 (-)
XLOC_023400 NA non-coding downstream 1628102 20181997 ~ 20185025 (-)
XLOC_023398 NA non-coding downstream 1750077 20060691 ~ 20063050 (-)
XLOC_023397 CR381686.1 non-coding downstream 1758870 20032331 ~ 20054257 (-)
XLOC_023437 AL627129.1 non-coding upstream 144042 21963052 ~ 21963168 (-)
XLOC_023442 NA non-coding upstream 234799 22053809 ~ 22066831 (-)
XLOC_023445 AL590147.1 non-coding upstream 489934 22308944 ~ 22309058 (-)
XLOC_023446 CT573489.1 non-coding upstream 552976 22371986 ~ 22372100 (-)
XLOC_023448 NA non-coding upstream 1059931 22878941 ~ 23218030 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_04738374_04757471 NA coding CI01000018 null 4738280 ~ 4757471 (-)