G418297


Basic Information

Item Value
gene id G418297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57010186 ~ 57011064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474104
GTCTCGTACGGCAGGCAAAAGAGCATTGAAGCAAGTGGCCAGAAATACACCCCCTCCAAAAGAATTGCAGAGTGCAAGAGCCTTCCTGTACCTTGGGGCTTTTTCAAAGTCCACCTGAATCATGAGTCGCACTGGGAGAAGAATCCCAGCCAACATGAGGGAAAACACTCCCAGAAGGCAAAGGACCTTGGCCACTACAAGCTCCATAATGTCCAGATATGGTATCGCTCAGTAATATGAGTGGCACATAACCCTCAAAGCCTCTTCTCCTATTTTCTGTCAGAAACAGAGATATGTCTTGTCATGCTGGTCCTGGTCCGAGAGGCTGTGACATCAACTCTGTTGTACACCTTCCCTTCACAGCTTC

Function

NR:

description
zinc transporter ZIP3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474104 True 367 lncRNA 0.49 2 57010186 57011064

Neighbor

gene id symbol gene type direction distance location
LOC100135807 LOC106613594 coding upstream 53864 56943838 ~ 56958165 (+)
LOC118964777 NA coding upstream 54724 56955324 ~ 56955462 (+)
dph5 LOC106613590 coding upstream 221533 56779858 ~ 56788653 (+)
serpinc1 LOC106613587 coding upstream 308030 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 321597 56658921 ~ 56688589 (+)
LOC110524109 LOC106613599 coding downstream 4864 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 15261 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 28053 57039117 ~ 57061390 (+)
LOC110524113 LOC106613602 coding downstream 53848 57064912 ~ 57074729 (+)
c5h19orf25 cssa10h19orf25 coding downstream 65736 57076800 ~ 57078287 (+)
G418252 NA non-coding upstream 44766 56963994 ~ 56965420 (+)
G418265 NA non-coding upstream 67521 56942425 ~ 56942665 (+)
G418264 NA non-coding upstream 68227 56941754 ~ 56941959 (+)
G418209 NA non-coding upstream 141981 56864489 ~ 56868205 (+)
G418210 NA non-coding upstream 145962 56863974 ~ 56864224 (+)
G418295 LOC106613600 non-coding downstream 2553 57013617 ~ 57015171 (+)
G418323 NA non-coding downstream 28672 57039736 ~ 57039941 (+)
G418379 NA non-coding downstream 131917 57142981 ~ 57143200 (+)
G418399 NA non-coding downstream 159171 57170235 ~ 57170470 (+)
G418428 NA non-coding downstream 216790 57227854 ~ 57231401 (+)
G418251 rtca other upstream 85010 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 280365 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 381569 56617890 ~ 56628617 (+)
G416857 NA other upstream 1684915 55324645 ~ 55325271 (+)
LOC110524119 LOC106613607 other downstream 354300 57352343 ~ 57367627 (+)
G419452 NA other downstream 873316 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1402059 58411240 ~ 58418268 (+)
G420634 NA other downstream 1931664 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 3683193 60694220 ~ 60695905 (+)

Expression


Co-expression Network