XLOC_023431 (CR352265.3)


Basic Information

Item Value
gene id XLOC_023431
gene name CR352265.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 21841238 ~ 21847945 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046345
AATGAGTATTTCTATGAATATTCAGCGTTTTATCATACGTTACGTTATCTCTGTTCCACAGCTAAACCTCCTAAATTCTGTGGTGGTACATCCCCTTTGCACCCATTATACATTTGTAATGGAGAGATGGACTGTTCCAGTGGTAAAGATGAGACAAACTGTACTCAGGGTAATGTGAAAGCTAAAAAATCTGACTTTAAGATGTGTCAGTTGTATGTTCTGTAATTAATATGTTTGATGTGCAGAGACTAGCTGTTCTGGAGTCAGTTATCAGTGTGACAATGGAGCCTGCATTCTTAAGAAAAATGCAAAATGTGATGGCTTTCCTGACTGCTTTGACCAGAGCGATGAAAAGAACTGTGCCTGTGGCAAACCCACCCATGTAAAACGTGTATTAGATGGCACCAGCCCTCAGCAGCGTATTGTGGGTGGAGTCAATGCTGTGGAGGGGGAGTGGCCATGGCAGGTCAGCATGCATTTTTCTGGTCAGCTGTATTGTGGAGCTTCAGTCCTCTCTGATGTGTGGCTTATTTCCGCAGCACACTGTTACAGCAAAGAAAGGTGAGAAACATCAGATGCATCTATAAATCATTGAAAatcaacatttaatacattttgttagtGTTTTCATACAGCATGTGTGATCTTTGATGCTTTCAGGTTGGCAGATCCACGTATGTGGATGGCTCATTTGGGAATGCTGAACCAGGGCAGTGCCAAGCATGTGGCCGAGATCCGTCGAATTGTGGTGCATGAGTACTACAATGCAAGAAATTTTGACTATGATATTGCCCTCCTGCAGTTGAAGAAGGTCTGGCCAAGCGGACTGGAACAATATATCCAGCCTGTGTGCCTGCCGGCCCCATCCCAAACCTTTACTGAGGGACACCGCTGCTGGGTGACTGGCTGGGGTTATCGTTCTGAACAGGATAAGGTACTACCCACAGTTTTGCAAAAGGCGGAAGTTAACGTTTTAAGTCAGAGTGAATGCAAGAGAAGTTACGGCCCTGTGTCGCCCCGCATGCTGTGCGCTGGTGTGCCCTCAGGAGAACAGGATGCCTGCCGGGGGGACTCGGGCGGTCCTCTGTCTTGTCAAGCACAGACAGGCAGCCGCTGGTTTCTGACTGGCATTGTGAGTTGGGGTTCTGGCTGTGGCAGGCCATACCTTCCCGGAGTTTACACCAGAGTAGCCAAGTTCATAGACTGGATACAGAGACATATTCATGATGAAAACTCATGAAAAACAGCCAAGTAAATCCACCTCATAATAAATTCTGGTAATTATTCTCACTCAAAACTAGCCATTTTCACCTAAAACTGTTCCACAGCAAGCAAATGTGTTACATTATGGACTGTCAGTGATGTTAGACTGAATATATTTGTCTTGAGGAAACTGAATgcagtgtatttaaaaaagaagaaagaaaatgttCTGAAGTTAACACAAAAAAGTACTGTATAATAGTGAATCACCACTTCAAGGATGTTTTGTAAAATGGCCGCTAAACTGGACATCAAGACTTCAATTCCAAATCTTTGGGTTTCATGCTGAATGTTCATTGCTGAACATAAGCAAACATTAAAACTGGTTTTGTATCTCCTTGCTAGAGGCAGCTGCATGAACTAATGGCGATATCAACTTTTAAGGTTATCAACTGCCCTTGTATTTGTATTGTTGCCATTCCAATTCATTTTAAACTGGTAGCAAGAAGATTTTGTCAGGCTGCATATAATGGACATTGGTTATGCTTGTGTAAACAGCACATACAAACTAGAAGAGTAAAGTTTAATGTTGGTTTGATAAAGCTACATGAGTTAGCCTGTTAAGTCTGTGCTTTCCCATGTGATATCGCTTTGTTTTGAACTTGAATTAGTATGCTGGTTGCATATATTTGTGAtaattgctagcatgtttcataatgaatatatgaatatatgttgctagcatgttttagcatgcaCTGACATTttgttaacacatttcttgtatgAATTTGCATGTGGCTAGCATGTTTACATACTGTATGGCTCATTGATGAAGGAATTGCTAAAAAGAGATGGAAAGAGAAGGAAATAAGAAGGAAAAGGCCAAGCTACTATGATTATTAATACTATGTCTTGTTGCAAAGTAATATGTCAtgcctatatttttttctttatttatttagataggGTAAAGACTCTATATAATTATAAAGCCCATTATTCGTGTTCATATATTGTACAAGCTAGAAAATTCGCGGGTTTTCTTTACGTAGTTGACGTAATACTGCGATTTTAAAATACGGATAACGTCCCAGTGAAACCCAGGGATCGTTGACTAATCAACAGTGTTCCGCACACGGGATGAATTGGGTCCGCTTTGTTCCCAGGCTGCACGCCTCGCTGGCCCGTAACGTGAGACACGGGGGGAAACAACGGGGAAATATTTAATCCTCGGGGACTCTTCTTAAACAAATATCTTAGCTATGCGCTTTTGTTTTTCATCCCCAGCAGACGGACCGCTATAATGACGCATTCTCCGCCGCGATTAATTTAATGGCGCTCTAATCATGTAACATCAGACTGCCCATTGTGGCCATGGCACACGCACACCACGGGAGAAGTTTGCCCACAATTTCTGTCGCACGGATGGCTGTGTGGATTGTACCTGCTTATAGTGCTCCCTTTGTGCCGCGGTGCATTCTGGGTACATGCAGCACCTGTTCACGGAGGGACACGGAGAGTGAATGCTCGCAGCGCCAGACCCGCTCAGGTCGGGTTTCTCCGGGATCGCACTACGTCTCCGGGCTGATTTCTCTGCCCGAGGTATTGTTCTGTATCGCTGCATCGGAGCCATAAGAGAGCGGGCCATGAGGACTTTTCCCAAAAATAGAAGCTGCGAAGTTTACAGCGTGTCTGGTTCAGAAGCCTGCGCCCCCGCCGGGGCACCTGCACAGGTAGGAGATCTAGACCCTCCATCAGCACCGCGACTACAGCGAATCAACGCGCGCATGATGCTTTCTAGCACCTCTGGCttcttatttttattcagtttattcagaTGTCTTTATATTTGCTTACAAATAAGTATCTTTTTTAAAGGCGAAACAGAAAGATCAGTGGTTTGGTTTAAATTTTGAGATATTATTCCttattaatctattttaatttGGAGTGTACACGCACACGGTAATCGTGCTCGCACATAATTACATCGTTTTAATTACAATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116575

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046345 True 3213 mRNA 0.43 4 21841238 21847945

Neighbor

gene id symbol gene type direction distance location
XLOC_023430 CR352265.1 coding downstream 22228 21813127 ~ 21819010 (-)
XLOC_023429 flt1 coding downstream 32419 21750810 ~ 21808819 (-)
XLOC_023428 flt3 coding downstream 127355 21691939 ~ 21713883 (-)
XLOC_023427 urad coding downstream 152092 21687276 ~ 21689146 (-)
XLOC_023426 lnx2a coding downstream 166242 21646317 ~ 21674996 (-)
XLOC_023432 spata13 coding upstream 15990 21863935 ~ 21903588 (-)
XLOC_023433 c1qtnf9 coding upstream 57772 21905717 ~ 21914276 (-)
XLOC_023434 tagln3b coding upstream 69067 21917012 ~ 21934571 (-)
XLOC_023435 acot9.2 coding upstream 90796 21938741 ~ 21952164 (-)
XLOC_023436 acot9.1 coding upstream 111763 21959708 ~ 21973365 (-)
XLOC_023665 dre-mir-735 misc upstream 16330016 38177961 ~ 38178027 (-)
XLOC_023407 NA non-coding downstream 1309425 20450027 ~ 20531813 (-)
XLOC_023401 BX247944.1 non-coding downstream 1653808 20187316 ~ 20187430 (-)
XLOC_023400 NA non-coding downstream 1656213 20181997 ~ 20185025 (-)
XLOC_023398 NA non-coding downstream 1778188 20060691 ~ 20063050 (-)
XLOC_023397 CR381686.1 non-coding downstream 1786981 20032331 ~ 20054257 (-)
XLOC_023437 AL627129.1 non-coding upstream 115107 21963052 ~ 21963168 (-)
XLOC_023442 NA non-coding upstream 205864 22053809 ~ 22066831 (-)
XLOC_023445 AL590147.1 non-coding upstream 460999 22308944 ~ 22309058 (-)
XLOC_023446 CT573489.1 non-coding upstream 524041 22371986 ~ 22372100 (-)
XLOC_023448 NA non-coding upstream 1030996 22878941 ~ 23218030 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_04759598_04770734 TMPRSS7 coding CI01000018 null 4759509 ~ 4770734 (-)