XLOC_023441 (si:rp71-1f1.6)


Basic Information

Item Value
gene id XLOC_023441
gene name si:rp71-1f1.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 22014810 ~ 22015751 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046363
CAGAGCTTACAGTGTGTGCTTGCTTGCTTGTATGTTTAATGTTTGTGATCCTGTTTTGGCTGAGTTTGGATTTAAAGTAATTGAGCTAAACAATAGCTACACTGCTAAATGATGGATGTTCAAAGGTATTTGGCTCGTATCGGCTGTTCTGGTCCATGTCCCCCGACACTGGAGACTCTGCGATATCTACACCTGAACCACTTACTGACGGTTCCCTTTGAAAACCTCACCATTCACACCCGGGGTCGGGTCAGGCTGGAGCTGCCACTTCTGTATGAAAAAATCGTGGTGAATCATCGTGGAGGATTCTGCTTTGAGATTAACGGACTCTTCTCCTGGCTGCTGTCTCAGATGGGTTATGATGTCACTTTGCTCTCGGCACAGATCAGGAGTCGGTTCACCGGAGCTTACGGACCTCCATTCGACCACTTGTTCTTGATGGTGAAGGTGGATGAACACAGGTGGCTCTGCGATGTTGGGTTTGGGTCTGGATTCCAGCTTCCTCTTTCTCTTGAGACTGACAGTCCTCAGATCCAGAGCCACGGCGTTTATCGCCTCAGATCTGAAGGAAACTTGATTTTCATGGAAAGTAAGTCAGAGATTGGTGGGGAATGTTGGACAGAACAGTATAAGTTCACTCTTGAGCCTCGAGACAGAGCTGATTTCAGAGCCATGTGTGACTACCATCAGAGTTCTGTTAGCTCACTTATGTTCTGTAAGTCTCTCTGTTCACTGTTGTTGCCCACCGGGAGAATCACCATCATGGGCCGCAGACTGATTATAAGCAGTTTGGGCTCAGGTGATGGAGAACATGCATCAAGAACCATAACAGATCTTTCAGATGAAGAAATCACAGAGCTGTTGAGGGAGAAGTTTGGAATTGTTCTTCAAGCTCCACTCATTCCTAAAGATAACGTGGTTTTACCACCAATCAAGTAttaa

Function

symbol description
si:rp71-1f1.6 Predicted to enable arylamine N-acetyltransferase activity.

GO:

id name namespace
GO:0016407 acetyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0004060 arylamine N-acetyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-256 Predicted to enable arylamine N-acetyltransferase activity.

Ensembl:

ensembl_id ENSDARG00000110278

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046363 True 942 mRNA 0.46 1 22014810 22015751

Neighbor

gene id symbol gene type direction distance location
XLOC_023440 si:rp71-1f1.5 coding downstream 11779 22002090 ~ 22003031 (-)
XLOC_023439 si:rp71-1f1.4 coding downstream 23040 21990964 ~ 21991770 (-)
XLOC_023438 apoob coding downstream 25404 21978230 ~ 21989406 (-)
XLOC_023436 acot9.1 coding downstream 41445 21959708 ~ 21973365 (-)
XLOC_023437 AL627129.1 coding downstream 51642 21963052 ~ 21963168 (-)
XLOC_023442 NA coding upstream 38058 22053809 ~ 22066831 (-)
XLOC_023443 dap coding upstream 54539 22070290 ~ 22103585 (-)
XLOC_023444 ctnnd2a coding upstream 103053 22118804 ~ 22732001 (-)
XLOC_023445 AL590147.1 coding upstream 293193 22308944 ~ 22309058 (-)
XLOC_023446 CT573489.1 coding upstream 356235 22371986 ~ 22372100 (-)
XLOC_023665 dre-mir-735 misc upstream 16162210 38177961 ~ 38178027 (-)
XLOC_023407 NA non-coding downstream 1482997 20450027 ~ 20531813 (-)
XLOC_023401 BX247944.1 non-coding downstream 1827380 20187316 ~ 20187430 (-)
XLOC_023400 NA non-coding downstream 1829785 20181997 ~ 20185025 (-)
XLOC_023398 NA non-coding downstream 1951760 20060691 ~ 20063050 (-)
XLOC_023448 NA non-coding upstream 863190 22878941 ~ 23218030 (-)
XLOC_023450 CT573302.1 non-coding upstream 1257491 23273242 ~ 23273359 (-)

Expression


Co-expression Network