XLOC_023459 (zmp:0000000991)


Basic Information

Item Value
gene id XLOC_023459
gene name zmp:0000000991
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 23988970 ~ 23998897 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046402
caaaaacaaccaattttattaatttaaaatagtaataaaaagtcATATGTGGATTTATTGTAGCCTTTAATGAGAGTAAACCAGAAGGTGCTTCTGTGTGAcgcaaatgaatcactgaatcggTTCTTTAGAGTGAACTTTTATGAAGAACCGATTCGCATTGATAATACGTAGGCCTGCTTTTGTTTACTATCACCcgcacaaatatattttatttatataaataaaacacggCTTGTTTATTCTCTGTTGCTATCATCATAGGTAatacttatattttatatatgactGAAACACTTTCTCTTTTGGAAGAAGTCCAAATATCACAAGTTCGCATgacatacaaaaataataaataaaacgcaaaCGTTGTCTTGGCATAGAATTTCTATATGTCCTGTAATACACTCGCCATTTTAAAGTACAGAGTTTGTTACCAAAACACAAGCGCGTTCCCGCACTTCCGCAGCTCTGCTctgcataacacacacacacacacgcctcgGTGGGAAAGAAACACATGACGGGCTGCGGCTGCCAGACTCTGTTGAGAATGACGGCTGTCCCACACCGTTTCTCCGCTGGAATTTACAGTCGTGGCTCTGTGAGGGTACTTAAGTGTACAGCTGATGCCCGGAGGGTATAAAGGGAGGTAACCGAACTAGATGCGCCAGCTACAGTCAGCCTATAATGTCAAAACATGATGCGAAGGTGCAGCAGTCAAGTTGTCAAAGCGGAGTGAAAGCCAGCGTGACTCGCGTTGTCTCAGATCAGGAGAgattttacacacacactgacaaaacACGTTTTCAGAATGTCAGTAAGCAAGAGAAATTAAATCCTGCTGCAGCTTCTCAACATAACCACAACAAGGAGGATTTAGAGACAAGAACTACTTCATCTCCACCACCGTTGCAGTTAAAAGGGCAGCAGAAAAGCAGCAGAGATTTGCAAATCAAGCAGATATTACTGTTTGGATCCAAGAATACATCCAAAGAACAGAGGGAATCTACCAGATTCACCTCCACCATCTCTATCAAGCTTCCCAccagaagaaataaaaaagacacagcagaggaaaaaaaattacaagcgACAACAAACTTCTACAGAACACTTGAAGCGGAGAAAAACACAGCTAATCAACACAACACAGAGCTGAGGGACTTGTTTTCATCGACAGAGCAATGTGGTGAATCAACTGGTGAATTGCTTAAGGATGGGCAAAAAGCAACCTTTGATGAAGCCACTCAGCATCAGCATGGACATAACACACCCAAACATGGACAAAATACAGGAATACAACACAACATAGGCCTTCATGAGCAAACCGACCACCAGGACTCACTAACACGCAACTCTTCTCATCTTATTTATGAGTTAAATTCAGAAGTAAAGAAGGAATCTGGAGGCCCTAGAGAGAATGCTCCAACAACTCTACAAAACCACAATAATCTGGACAGTGTTCTAAAAGCAAGCACTGATTCCCAACTTTTTCCACACCAGTCAGAAGTACTTGACCAGGTTTTGTCGTTAGCCGGTTTTCCGGGGTATTCTGAAAAAACTCCTGAGGTAAAAGCTAATGTTATAAATCCTACAACGGCTATGTTGACTTCTGCACTGGCTTCAGTTCTAGCTCCACCTTGGAGTGGCCGTCTTCGAAGACCCAAGCAAGGCATCAGTGAGGCAGAGACTGAAGTTCAAGATCGTGGACAGTATGGCAACCCATCTACCTTAATTCAACAGGATTGGCGGCAACAACCTTATCTTCCTTTCCAGAGGCAACCATCTGAACACATGATGGCCAATGACAGTAACATGCAGGTGAATGCTGGAACCAGCTACTCTGCTGACTGGCAAAAAGAGAATAACTCTCCAAATGTCACGACAACAGTAAACCAAAAGAGACCCATTACAAAATCCTCCTCTGTGGGCATGACGTACACCAATAGAGAATTGCATTCTTTTCCCACAACTCTGGACTCACGTCAGGTGCCAAATTTACCTCATTCAGGATATAGAGTATCAAAAACTGGAGATGAAAATGAACCTTTTAAATCATTGAGCTCCAAGCCTACAACAAGCAGTTTACTTCTTTCTTTGAGGAGATCAAATTTGAGAAACTCTACTCCTGAGCCTACACAAACTCCGATAACTAGATCTATAAGGTCACTTACATTGCCTAGCAGAATTGTTTTGAAATCTGACCAATCTGTTACCTCTGAAGAGCAAATCAACAAAAACCCTGACACTCCTGTAAGAACAGAGGGAATGCCAGTCGGTCAATTTCGATTCTCACCTAGAATCAAGAGTAGGGTACCATTAAacacatcaatgttttcaaataaacaagaGACAGTCATTTCAAAGGGACTGGACGCTTCTGTTGCCACAGTAGAAGTAGAGAATAAACATTTCCCTCATTCCACAACCAAAACCAGCCAACTTGGGGCTCTCAAATCTCATCAGAGTTCTTATTTGGTTCTTTTAAGGGAATATTCTAGCACAGAGAACATTGATCCCATGGAACAAAGTCCTGGTAACGGCAACAACCTGCAGAACCCCAACATTACCAAACGACAAGTAATTCAAAACACTGTAATTCCTCCCAAAGATTCAACAGGTTTTCAAATTCAGCAATCTAGTTTTCATATGTCAAAATCACAAAGCACACATAATATAACAGCTAGCAATTTTTCCGGCACAAGCACTTTCACAGACAGACTTATCTTCTCCCCCCGAAAAGACTCCTCTGCAGATGGACTAAGCCCAACAAATGTGGGGCAGATATACTCCAGGAAAAATTCAAGTCAAAGCTCAATGGATCTTTCAAGCCCTCTTTCTCCAAGCAGACCTCTTCATAGTGTCAGAGTACCGAGCATCTATTCATACCTACGGGAGTCTAGTTCATCTCTGTCCTCCCCTTCCCCTTCCACCCCTTTGTCCCAGATACAGAATGCTGAAACCTCACCTCCTAAACAAGATGGGGGTGTAAAACAGCATGATGACTGGAAAACACTTCCCTCAAGATTTTCATTTGACTTCAACCCATCTGTTCCCAAGGTACAAGAATTAGGTAAAAGCTTAAGCACTTATGCAGCTCCTGCTCAATCTCTGCCTCCTGACTTTGGAAGAGGATCAGCACCTCGTCTCAGCACTTCTCCGTATTCTAGCCTCATCTCCTCAAGACCTGCACTGAGTAGTACTTTACAAGGACTGTCCTCTCCACCTGTGCCTGAAACACATACCCGATCTACATCTTACAACAATAATCCTGACCTTATAACAAACGACCCAAGTTCTTTAACATCCAAATACACAAGCATAACAATAAGACCAAGGGAAGATTCAGCTTCATCTCACAGAGAACAGAGGACAGCAGTTCAAGCTTATGCAAGCAACCTAGATAATAACAGACCTGCCCAGCCATGTCTCTCACAAACTACAGCAAATGCAAGTTTTGTCATGGAGAGCCGAAGCGCCAATATAAGCTCACACCCAAGGCAGCCCAATACAGGCTCTAACAACTTCCATAACCTAGAACATGATGACTCAATGGCACTTAGGCTTGATAAGGGTAATGTTTACCCCAAGCACAGGCTGAGCGAAAAAGAGAAGTACTTTCTCCCTAAAGACCTTAATGCACAACGTCAGACTCCACTTCCACATGAGAAAGAGACTACCTCTGGGCATATGCAAGAGAAATTGCAAGAAACACAGAGTCCCAATTCAAAGAAAGGACTTTTTGCTTCACGAGTAAAGAAAGATGGTGCCTTCTCTTCAGCTTCTTTGCCAGAAAAAGAAGTTGGTAGTTCCcagtttttaaaaactaaaagacATTTACCAGTTTTCAGAACAACCAGCAGGATTGATCAAATGCTAAATCGATTGAAACTGACGTTTGGTGTCAAAAGTTCAGAAGGCACACTTGACACAAAAAAGACCCCTACTCAGCAATCCTTAGACACTGAGACTTTTGAAAAACCCAAAACAGATAAGAAAACTTGTTCTGGAAACAAAGGAGAACCCTGTAACTCCTCTTTAACAACTAATAAAGTCTCCCTGGGTTCATTGTCACCAACAGAATTAAGTATGTCTGAACGCACATTAAATGTGGATGGACAAAATAGGTCTACGGCTGAAATACAGTATTCCAAGTGCATGTGGGAAGTACCTAACTCATCTTTGACCGCTAATAAAGAAACGTTTGGGTCATTGCCGCCACTTGCAATAAGAAAGTCAGAGAATACTTTCGATATGGATTGGCAAAACAAGTCAACAAAAACGAACAATCAACAAAATGGTTCTGGGTGCACATGGGAGGCCCCCAGCTCATCTTTGACCACTGATAAAACCTATTTTGCCTCTTTTGGGTCCTCATCACCCTTATCTTCAAAGAAATCATCAGACAACAAACTAAACGTTGATCAACAAAAGATGGATAGCAATGAAATGGAAAACCAGTCAAATGGCGGGAGCTTTAGTCAACACAGGCTAAAGGCCCAAAGCATGAACCGCTCTGCCACCTTGCCACATTACAGAAAATCTTCAGTTGGTCCACCGTCACCATTTTACTTGTTTGATTTAGATTCAGAAGACATTCAGAATGACAATGTGTTTTATAGTCCGATTAGCAAAAAGACAAATTCACTGTGCGAGTCTGATGACATCTCTCCACTAAGCTCTGCTAAGAGTTCCCTGCCGCAAAACCTTGTGAGATCTCACTTGTCCTCATCATGTGCTGATTTAAAGTATGGCCTGCATGCTGGACGATCTTTCTCGGTCAGTGGCGTGGTTTCAAGCCGCCCATCAGGTTCCAGACGAATCTCAACAAGCAGCACCAGCGACCTCTCGAGCTTGGAAGACTTTGGATCAAAGGGGAATCAAACGGTTGACTCCTTAATGAGTACTAGCCTTTCCCCAAGCAACAATGCCAAATCAGTCACTGGTAAACCGTCTCAAACTGAATTTACAGACGATTGTCTTGAACTTGATTTTGCAGACCCAACCCCACCTCCATCACCAACTTTTTCCTCATCTCCTCGTCGGATATCACAAGCCCATGCTACACCGTCCCCCATCAGGACAACTCCTGAAAATCTGTCTCCTTTTCAGCTTCCCTCAAGGAGCTTCACAAACAGCCTGACTGTTTTTGAGGAGTCTGGTTCTGACACCACCACCGATGATGAATACTATATTGGCAGTGGTGGTGAAGATGATCTAGAAACAGAACTTTAGATTGTTATTCAGTTGCAGATGTGCTTACAATTTATACTGCCTTTATACTgcatttgtcaaacaatatccAAATTCTGAATACCACTTGGAACCCAGTTCTTGCATTAACAGAAGGAATTATAATTATATGTGATGCTTTTCATGTTATGAATTGTCCTTCTTGAATCTTTTAGTGTGGATAACTACGTTTGCTTTAAC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-994 No description available

Ensembl:

ensembl_id ENSDARG00000090346

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046402 True 5436 mRNA 0.42 5 23988970 23998897

Neighbor

gene id symbol gene type direction distance location
XLOC_023458 ndufb4 coding downstream 11685 23971056 ~ 23977285 (-)
XLOC_023457 arxa coding downstream 46248 23936829 ~ 23942722 (-)
XLOC_023456 rrs1 coding downstream 149323 23837519 ~ 23839647 (-)
XLOC_023455 SGK3 coding downstream 204269 23758510 ~ 23784701 (-)
XLOC_023454 MCMDC2 coding downstream 230967 23729908 ~ 23758003 (-)
XLOC_023460 lyz coding upstream 36966 24035863 ~ 24060632 (-)
XLOC_023461 NA coding upstream 96419 24095316 ~ 24098879 (-)
XLOC_023462 zgc:112982 coding upstream 102914 24101811 ~ 24163201 (-)
XLOC_023463 eif1axb coding upstream 165330 24164227 ~ 24168533 (-)
XLOC_023464 rps6ka3b coding upstream 184855 24183752 ~ 24271629 (-)
XLOC_023665 dre-mir-735 misc upstream 14179064 38177961 ~ 38178027 (-)
XLOC_023451 NA non-coding downstream 346065 23383112 ~ 23642905 (-)
XLOC_023450 CT573302.1 non-coding downstream 715611 23273242 ~ 23273359 (-)
XLOC_023448 NA non-coding downstream 770940 22878941 ~ 23218030 (-)
XLOC_023446 CT573489.1 non-coding downstream 1616870 22371986 ~ 22372100 (-)
XLOC_023445 AL590147.1 non-coding downstream 1679912 22308944 ~ 22309058 (-)
XLOC_023466 NA non-coding upstream 417427 24416324 ~ 24503022 (-)
XLOC_023467 NA non-coding upstream 493306 24492203 ~ 24492517 (-)
XLOC_023468 NA non-coding upstream 554896 24553793 ~ 24695757 (-)
XLOC_023471 NA non-coding upstream 801879 24800776 ~ 24829401 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_05997348_06004889 NA coding CI01000018 null 5997154 ~ 6004889 (-)