XLOC_002349 (ei24)


Basic Information

Item Value
gene id XLOC_002349
gene name ei24
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 39199547 ~ 39207900 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004458
GGTATCAAGGACTCGATCCTGGGCATTGGAACCATCTCCAAACTCGATGCTCGGATTCAGCAGAAGCGAGAGGAGCAGAGGAGGCGCAGGTCGTCTGGAGCTCTGGCGATGAGACGAGCTCAAAGCGAAGAACGAAAACAAGACAGTGAACCCAAACTAGTAAGTCGAATTTTCCAGTGCTGTGCCTGGAATGGAGGTGTATTTTGGCTAAGCCTGTTCCTGTTTTATCGAGTGTTTATCCCGCTGCTGCAGTCTCTCACTGCTAGAATTATAGGTGACCCTTCGCTGCATGGGAATGTGTGGTCGTGGCTGGAGTTCATTCTGACATCTGTATTCAGTGCTCTCTGGGTTTTACCGCTATTTGTGCTTAGCAAGATAGTCAACGCCATTTGGTTTCAGGACATTGCTGATCTGGCGTTTGAAGTGTCTGGACGTAAAGCTCAACCTTTTCCCAGCGTCAGTAAGATCATCGCAGACATGCTCTTCAATCTTCTGCTCCAGGCTCTCTTCCTGATTCAGGGATGGATTGTGAGTCTCTTTCCCATCGATGCTATTGGTCAGCTGGTCAGTCTCCTGCACATGTCTCTGCTCTACTCGCTTTACTGCTTCGAATATCGCTGGTTTAATCACGGAATTGAAATGCACCAAAGGCTGTCAAACATCGAGAGGAACTGGCCGTATTATTTTGGCTTCGGTTTGCCCATGGCTCTACTGACCGCTCTGCCCTCTTCATACATCATAAGCGGTTGTTTGTTCTCCATTCTCTTCCCGCTCTTCATCATCAGCGCTAATGAAGCAAAGACCCCAGTCAAGCTCTACCACTTCCAGCTCCGGCTCTTTTCCCTGGTCGTCCTCATCAGTAACAAACTGTTCCACAAGACGGTGAATCTGCAGAGCTCCCTCAGCACCTCCGCGTCCACAGAGAAGCTGCCGTCTCCTCACGTGTCCCCGACCCGCCAGCGACCTTTACCCCCTCAGTGACCTCTTCAGGATTCACCTCTCGCTCTGAAAGGCGGGAAAACGATCCATTACGCACTCTCTGCATTTGAAAGCGTGAGTCTGTGCTCTTCTGGACGAGTTGGTAATGTGAATCAAGGTCATGATTCTCGGtgtgattttaaattttttttttttctcggacTGATTTTGTACCCATTACGTGCCATTTGGGTGATTTGTAGAGACGGCACAAAGACCTCAGCGTGCACATTTTCTGTGAATTGGCCCACCGTCCTCTTTTTAGGCCCTGTAGTCTACATTAGTCGACTCTTTTTATCTGTTTATGGCcttctttttaattttatgtacTTTTTTGAGGCTCAGACACGCGAGAGAGTGTATTTATCAATGAACACTAAACTCTATGAAGAAAAAAGTTCCTGATGGTTTACTTTCCTGCACTGACAACTGATCTAGAGTCAAAAGGATCAATTTTAAAGCCCTCTTTGAGCAGTAGATGTTTCTTGATATGAAAGTTATGAgttatcggtaacactttacaatatggggACACTTGGTTAATGTATGTTCTAACATACATGAATAAagtttgtacagcatttattagttATAGTTCATGGTTTACTAATGGGATTAGTTagtaaaagggatagttcactt
>TCONS_00004459
acAGTGAACCCAAACTAGTAAGTCGAATTTTCCAGTGCTGTGCCTGGAATGGAGGTGTATTTTGGCTAAGCCTGTTCCTGTTTTATCGAGTGTTTATCCCGCTGCTGCAGTCTCTCACTGCTAGAATTATAGGTGACCCTTCGCTGCATGGGAATGTGTGGTCGTGGCTGGAGTTCATTCTGACATCTGTATTCAGTGCTCTCTGGGTTTTACCGCTATTTGTGCTTAGCAAGATAGTCAACGCCATTTGGTTTCAGGACATTGCTGATCTGGCGTTTGAAGTGTCTGGACGTAAAGCTCAACCTTTTCCCAGCGTCAGTAAGATCATCGCAGACATGCTCTTCAATCTTCTGCTCCAGGCTCTCTTCCTGATTCAGGGATGGATTGTGAGTCTCTTTCCCATCGATGCTATTGGTCAGCTGGTCAGTCTCCTGCACATGTCTCTGCTCTACTCGCTTTACTGCTTCGAATATCGCTGGTTTAATCACGGAATTGAAATGCACCAAAGGCTGTCAAACATCGAGAGGAACTGGCCGTATTATTTTGGCTTCGGTTTGCCCATGGCTCTACTGACCGCTCTGCCCTCTTCATACATCATAAGCGGTTGTTTGTTCTCCATTCTCTTCCCGCTCTTCATCATCAGCGCTAATGAAGCAAAGACCCCAGTCAAGCTCTACCACTTCCAGCTCCGGCTCTTTTCCCTGGTCGTCCTCATCAGTAACAAACTGTTCCACAAGACGGTGAATCTGCAGAGCTCCCTCAGCACCTCCGCGTCCACAGAGAAGCTGCCGTCTCCTCACGTGTCCCCGACCCGCCAGCGACCTTTACCCCCTCAGTGACCTCTTCAGGATTCACCTCTCGCTCTGAAAGGCGGGAAAACGATCCATTACGCACTCTCTGCATTTGAAAGCGTGAGTCTGTGCTCTTCTGGACGAGTTGGTAATGTGAATCAAGGTCATGATTCTCGGtgtgattttaaattttttttttttctcggacTGATTTTGTACCCATTACGTGCCATTTGGGTGATTTGTAGAGACGGCACAAAGACCTCAGCGTGCACATTTTCTGTGAATTGGCCCACCGTCCTCTTTTTAGGCCCTGTAGTCTACATTAGTCGACTCTTTTTATCTGTTTATGGCcttctttttaattttatgtacTTTTTTGAGGCTCAGACACGCGAGAGAGTGTATTTATCAATGAACACTAAACTCTATGAAGAAAAAAGTTCCTGATGGTTTACTTTCCTGCACTGACAACTGATCTAGAGTCAAAAGGATCAATTTTAAAGCCCTCTTTGAGCAGTAGATGTTTCTTGATATGAAAGTTATGAgttatcggtaacactttacaatatggggACACTTGGTTAATGTATGTTCTAACATACATGAATAAagtttgtacagcatttattagttATAGTTCATGGTTTACTAATGGGATTAGTTagtaaaagggatagttcacttaaaaaatttatttactcATGATTTACTCATCTTCAAGTGGTTTAAAAACTTTTATGAGGTTCtttcttccattgaacacaaaataagatatttagaagaatgttagaaacctgtaaccattgataactcactcaaaaaataaaaacttacttaatatttactcatcctcaagtggtttaaAAACCCTCATTAGgtagatttttttctgttgaacacgaaataaGACACTTTAAAGAAtgatagaaacctgtaaccattgacagtgcactcaaaaaatgtaaatttactcatcctcaagtggtttcaaatctttataaggttctttcttctgttgaacacaaaataagatttttaagcatgttagaaacctgtaaccattgataattcatttaaaatatgaacatttacaaaa

Function

symbol description
ei24 Predicted to be involved in macroautophagy. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human EI24 (EI24 autophagy associated transmembrane protein).

GO:

id name namespace
GO:0016236 macroautophagy biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko04115 p53 signaling pathway

ZFIN:

id description
ZDB-GENE-050417-457 Predicted to be involved in macroautophagy. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human EI24 (EI24 autophagy associated transmembrane protein).

Ensembl:

ensembl_id ENSDARG00000053840

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004458 False 1620 mRNA 0.46 9 39199547 39207488
TCONS_00004459 True 1890 mRNA 0.41 8 39200213 39207900

Neighbor

gene id symbol gene type direction distance location
XLOC_002348 B3GAT1 coding upstream 20210 39164638 ~ 39179337 (+)
XLOC_002347 si:ch73-1a9.4 coding upstream 76334 39091353 ~ 39123213 (+)
XLOC_002346 NA coding upstream 111694 39084012 ~ 39087853 (+)
XLOC_002345 dscama coding upstream 225102 38775408 ~ 38974445 (+)
XLOC_002344 CABZ01051877.1 coding upstream 439103 38749266 ~ 38760444 (+)
XLOC_002350 stt3a coding downstream 4701 39212601 ~ 39234155 (+)
XLOC_002351 foxred1 coding downstream 41011 39248911 ~ 39273031 (+)
XLOC_002352 dcps coding downstream 76085 39283985 ~ 39294725 (+)
XLOC_002353 kcnj1b coding downstream 96522 39304422 ~ 39307819 (+)
XLOC_002354 NA coding downstream 121402 39329302 ~ 39393816 (+)
XLOC_002342 CU896636.1 non-coding upstream 515767 38683666 ~ 38683780 (+)
XLOC_002336 BX000451.4 non-coding upstream 651342 38548089 ~ 38548205 (+)
XLOC_002333 BX000451.1 non-coding upstream 710718 38488708 ~ 38488829 (+)
XLOC_002356 CR854987.1 non-coding downstream 552854 39760754 ~ 39760879 (+)
XLOC_002357 NA non-coding downstream 572661 39780561 ~ 39780849 (+)
XLOC_002359 NA non-coding downstream 701238 39909138 ~ 39917508 (+)
XLOC_002361 NA non-coding downstream 914474 40122374 ~ 40281002 (+)

Expression


Co-expression Network