XLOC_002357



Basic Information


Item Value
gene id XLOC_002357
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 39780561 ~ 39780849 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005731
agtgtaatcaaggccagctagcgaagtgctatgcaggtaaaccttactccttGGACCTCAAAATGTGCTCTAGCGACAGTTGATAGAAGCTATGGTCTTTAACCTTCTTGGTAGATTTACCAACTACCATGCAAAaaatcgctggtttgatcccagcacagactgggttgggtgcagtaggaccagtgggttacatgtgggggctcgtctgggatgggagtgaggtttcaGTGGATGAGTGTAATAAAGACCAACTAGCGAAGAGCTatatgcaggtaaaccttactcc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005731 True 289 lncRNA 0.47 1 39780561 39780849

Neighbor


gene id symbol gene type direction distance location
XLOC_002356 CR854987.1 coding upstream 19682 39760754 ~ 39760879 (+)
XLOC_002354 NA coding upstream 386745 39329302 ~ 39393816 (+)
XLOC_002353 kcnj1b coding upstream 472742 39304422 ~ 39307819 (+)
XLOC_002352 dcps coding upstream 485836 39283985 ~ 39294725 (+)
XLOC_002351 foxred1 coding upstream 507530 39248911 ~ 39273031 (+)
XLOC_002358 smfn coding downstream 112590 39893439 ~ 39905253 (+)
XLOC_002359 NA coding downstream 128289 39909138 ~ 39917508 (+)
XLOC_002360 BX927333.1 coding downstream 172146 39952995 ~ 40113996 (+)
XLOC_002361 NA coding downstream 341525 40122374 ~ 40281002 (+)
XLOC_002362 git2b coding downstream 503154 40284003 ~ 40317479 (+)
XLOC_002346 NA non-coding upstream 692708 39084012 ~ 39087853 (+)
XLOC_002344 CABZ01051877.1 non-coding upstream 1020117 38749266 ~ 38760444 (+)
XLOC_002342 CU896636.1 non-coding upstream 1096781 38683666 ~ 38683780 (+)
XLOC_002364 NA non-coding downstream 755013 40535862 ~ 40536526 (+)
XLOC_002366 CR396590.2 non-coding downstream 769881 40550730 ~ 40550954 (+)
XLOC_002367 CR396590.5 non-coding downstream 774068 40554917 ~ 40555131 (+)

Expression



Co-expression Network