Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_023666 |
| gene name | igic1s1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 38194136 ~ 38197040 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| igic1s1 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
| id | name | namespace |
|---|---|---|
| GO:0045087 | innate immune response | biological_process |
| GO:0050871 | positive regulation of B cell activation | biological_process |
| GO:0006910 | phagocytosis, recognition | biological_process |
| GO:0006911 | phagocytosis, engulfment | biological_process |
| GO:0042742 | defense response to bacterium | biological_process |
| GO:0006958 | complement activation, classical pathway | biological_process |
| GO:0050853 | B cell receptor signaling pathway | biological_process |
| GO:0009897 | external side of plasma membrane | cellular_component |
| GO:0042571 | immunoglobulin complex, circulating | cellular_component |
| GO:0034987 | immunoglobulin receptor binding | molecular_function |
| GO:0003823 | antigen binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-051013-12 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
| ensembl_id | ENSDARG00000093272 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00046707 | False | 565 | mRNA | 0.54 | 2 | 38194136 | 38197040 |
| TCONS_00046708 | True | 363 | mRNA | 0.61 | 3 | 38194323 | 38197040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_023664 | crp7 | coding | downstream | 2133 | 38137473 ~ 38192003 (-) |
| XLOC_023663 | crp6 | coding | downstream | 62755 | 38130604 ~ 38131381 (-) |
| XLOC_023662 | si:ch211-234p6.9 | coding | downstream | 72015 | 38121403 ~ 38122121 (-) |
| XLOC_023661 | crp2 | coding | downstream | 80928 | 38109799 ~ 38113208 (-) |
| XLOC_023660 | BX001030.1 | coding | downstream | 94461 | 38098896 ~ 38099675 (-) |
| XLOC_023667 | NA | coding | upstream | 798 | 38197838 ~ 38215482 (-) |
| XLOC_023668 | igl3v5 | coding | upstream | 5258 | 38202298 ~ 38205136 (-) |
| XLOC_023669 | NA | coding | upstream | 14063 | 38211103 ~ 38212927 (-) |
| XLOC_023670 | NA | coding | upstream | 44134 | 38241174 ~ 38252296 (-) |
| XLOC_023671 | zgc:91999 | coding | upstream | 72048 | 38269088 ~ 38288883 (-) |
| XLOC_023665 | dre-mir-735 | misc | downstream | 16109 | 38177961 ~ 38178027 (-) |
| XLOC_023658 | BX001030.2 | non-coding | downstream | 101548 | 38085317 ~ 38092588 (-) |
| XLOC_023652 | NA | non-coding | downstream | 467187 | 37724974 ~ 37726949 (-) |
| XLOC_023651 | NA | non-coding | downstream | 486085 | 37705626 ~ 37708051 (-) |
| XLOC_023644 | CU469584.1 | non-coding | downstream | 789670 | 37361189 ~ 37404466 (-) |
| XLOC_023673 | CU681836.1 | non-coding | upstream | 199532 | 38396572 ~ 38397488 (-) |
| XLOC_023674 | CU681836.2 | non-coding | upstream | 249840 | 38446880 ~ 38447958 (-) |
