LOC110525011 (LOC106585326)


Basic Information

Item Value
gene id LOC110525011
gene name LOC106585326
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20986307 ~ 20987868 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604973.2
GAGGACTTCGAATGTCAGCCGGGACAGTGGTTATCTGTGGTGGAATTCTAGCTACAGTCATCTTACTGACTATCGTTGCAGTACTGTGCTACTGTAGGTTGCAGTATTATTGCTGTAAGAGGGAGGAgccagagatggaggaggagcaaCCGGACCTCACCATCATGTCCTCTCTCCCCACACCAGTGCACACGGCTGATGACCAGGACATGATGACCACGCCCCCCTCTGAGCCCAACGGGCCCGCCTTTGTCTACACTCCTTCCCTGATCCGCAAACCAATGACACACTCCCATAGGTTTTGCCCATCCTGCACTCGCTACTCCTTGCCCTTCTACCTGCAGCACTCCTCTGAGAGACTGCATAACGGTGGCGGCCGCATCAGCTACAGGACTGTGCAGCAGCAGGAACTGGACCTGCCAATGGACCTGGCCAGCTTCAACCACAAGCTCAACCTCATCCGCTCTGTCACCATGAGGGAAGTGGTCACTCACAGCCACGGTGTCAGCACTGATGTGTAGCCCCATGGTGGCTGGGAGGACTAATGTTAGGGACCTGACCTGGCTGAAGGGAATTTTATTGCACTCTTACTTACTGTAGATATTTTCCACCTCACCAAACCGATGGATACGTTCACTCGCTCACATGATGTAGAGAGGTTTTTTGGTGTCACATGCAGATATATGGACACCTACTCCTGAATTCACatgaacattttttttaaatggcttaATATCATAGACATATAGGATCTGTGATTATGAGGGAGACATTTTTTCTCAAGAGAAGTTTAAGCAGGCAGATTAATAACTTTGGTACTCTGTATGTTGTGTGATTGCTGTACATTCTCTTTGGGTTTATGCAGGTGATGACACATAAGCTACTGTAAGCTGCTAAAATAAGTCCAGAACCCTAAGTAATATTTTAGAGTAGACAGAAAATGACCTGATTCACCAATATTCTGAAGTGTTCTGAGTGTCCTCATAACAGCTTCTTAGAGTGTGAAAACTGAACTATTTTAAGAGCTAATTTGGTGACAATTTAATGGGAAAATATGCTTAAATATGTATTTGAAGGGATTTTCATGTCGTTCATTGTCAAGTCATATACTTCAAGTTCCACAATACATTTGACATACGTCAATTGAGTTGGTTTCTCCAGTAATGTGTGTAATGTTCACTTGGCAAGTATGGGTGGCACACCCCTTTTTGTTTTGTGAAGAAACGTAACATGTCTTGTTTGCTTTAACAGGGTTTTGTCTTCTTAGTGTATAGGATATTTGTTTGTTATTTCAGCAGTAAATGTGAGAAGGAAAACGACACACAGAAACCAGCAGGTGGCATCAGGTCCTAATACATGCTTTTCCCATCATCGATACTACTACTTTGGATGAACCATATGTGAAATAGTGTCAACAataaa

Function

NR:

description
protein FAM163B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604973.2 True 1422 mRNA 0.44 2 20986307 20987868

Neighbor

gene id symbol gene type direction distance location
LOC110525450 slc2a8 coding downstream 46588 20926969 ~ 20939719 (-)
lcn15 LOC106585399 coding downstream 60249 20923163 ~ 20926058 (-)
jak2b LOC106585396 coding downstream 63979 20878464 ~ 20922328 (-)
zgc:114041 LOC106585395 coding downstream 115132 20867034 ~ 20871175 (-)
LOC110525445 LOC106585393 coding downstream 165558 20802193 ~ 20820749 (-)
tor2a tor2a coding upstream 44151 21032019 ~ 21037968 (-)
LOC110525458 LOC106585411 coding upstream 127152 21115008 ~ 21121728 (-)
zbtb26 LOC106585412 coding upstream 143263 21131131 ~ 21135690 (-)
LOC110525460 LOC106580020 coding upstream 155588 21143456 ~ 21147581 (-)
LOC110525461 LOC106580020 coding upstream 161072 21148940 ~ 21159499 (-)
G484400 NA non-coding downstream 5664 20980396 ~ 20980643 (-)
G484262 NA non-coding downstream 341259 20641190 ~ 20645048 (-)
G484249 NA non-coding downstream 354951 20624675 ~ 20631356 (-)
LOC110525433 ccng2 non-coding downstream 395180 20584162 ~ 20591588 (-)
G484136 NA non-coding downstream 470072 20476734 ~ 20516235 (-)
G484410 NA non-coding upstream 16177 21004045 ~ 21004375 (-)
G484411 NA non-coding upstream 16615 21004483 ~ 21004764 (-)
G484409 NA non-coding upstream 19148 21007016 ~ 21009082 (-)
G484423 NA non-coding upstream 36974 21024842 ~ 21025595 (-)
G484424 NA non-coding upstream 38932 21026800 ~ 21027422 (-)
G484232 NA other downstream 377571 20588262 ~ 20608736 (-)
G484175 NA other downstream 546623 20439307 ~ 20439684 (-)
G483875 NA other downstream 1050581 19933244 ~ 19935726 (-)
G483145 NA other downstream 1265691 19710075 ~ 19720616 (-)
G484807 LOC106585304 other upstream 308712 21296580 ~ 21298173 (-)
G484895 LOC106585423 other upstream 444062 21431930 ~ 21434719 (-)
G485279 NA other upstream 845680 21833548 ~ 21834360 (-)

Expression


Co-expression Network