LOC110525477 (LOC106585431)


Basic Information

Item Value
gene id LOC110525477
gene name LOC106585431
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 21738368 ~ 21740331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605608.2
AAAGACCAATTCTGCTTCTGCCTGTATATATTACATATCATGGTTGTGTGCGACTACAGCAGACCAAATCCTCATATAGAAGTCAGGGGAAGTAATAACTAGTTTGTCATTCAGGACTTGTCCCACTGATGGACTGCAAGCGCGAGCTTAAGTGAATGTTAATAGCCGGCATACCCCATACATTCCATCCTAAAATGAACAGCACAGTGTCTCCGTCCGTGTTGCCTCTGGACAACAGAAGTCTCTCTGAGTCCTGTACAGTGGAACCCCAACACGTGTCCATCACTGTTTTCCTCCTCCTGGTTGTCCTGGTTGGTTTCTTCCTCAACAGTTTCAGTCTGTGGGTCTTCTGCTGCCGTATACCACAGTGGAGCTCTGGTACTGTCCTGCAGTTTCATTTGGCTGTCAGTGACACTGTTATCACACCAGTTGCACCATTAATGGCAACATACTTTGTTATGGGTAGCCACTGGCCCTTTGGAGCTTTTCTGTGCAAGCTGAAGATTGCCTTGCTGAGCATTCACTTCTATGGCAGTATCCTGTTCCTTACACTCATCAGCATTCATCGATATGTGGTAGTTGTCCAGTTTAAAAGGGGCTCCTGTATGAAACGAAAGGCGTTTGTTCAGAATCTGTGTGCTGGAGTCTGGCTGGTTTTGCTGGCTAAGGGAATTGCCTGTTTCTTCTTATTGAACACAAGTCCAATGGGAAACCGCACACAATGTCTCAGCATTCATCAGGAAAAATACATTGACGTCTACTTCGCCATCAACTTCGTTATGCTCATCCCTGGGTTCCTGCTGCCTCTCTCAGTGGCAGTGACCTGCTATGTTCAGCTAGCAAGATCAATGTCTCGTATCAATATCAACATGTCCAAGGGCCGTGATATAAAGGCCAAGTCACGTAAAATGGTGGCCATGTGTCTGGTGATATTTGCACTGTGCTTCACTCCTCTGAACGTGATACGAACTGTGGCTGTCATATTAAAGAAGTACTTTCCAGAACAATGCAGTCTTCTCCTGCAGGTGGAGACTGCATACTATATCTCCTGGATTTTGGCTGGAGCAAACTGCTGCCTGGACCCATTGCTTTATTGTTTTGGATCACACAACTTTGTCAAGGCTATTCATAGGTCTCTCAGAAAATTTGATGTCAAGTTTAAAAAAGACCCGGCCACAAATGACCAGATCATCTATGATACTGCTATTGATTCTCCCTCCATTGACTTAGAAGACATCCACACCCAGCATTCGAACACATCTTGAATAAGGAACCTCATAGTAGTATAATCACATTGGCTTATTGTGTTTGCTCAGTGCCTTTTTCTTTTTT

Function

NR:

description
P2Y purinoceptor 2-like

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605608.2 True 1332 mRNA 0.45 2 21738368 21740331

Neighbor

gene id symbol gene type direction distance location
p2ry2 p2ry2 coding downstream 763 21735689 ~ 21737605 (-)
LOC110525475 LOC106585430 coding downstream 5844 21718415 ~ 21732524 (-)
ehmt1a LOC106585429 coding downstream 36619 21691111 ~ 21701749 (-)
cacna1ba LOC106585428 coding downstream 49227 21499304 ~ 21689141 (-)
si:dkey-61l1.4 LOC106585426 coding downstream 244445 21464228 ~ 21493923 (-)
LOC110525478 LOC106585434 coding upstream 5145 21745476 ~ 21764123 (-)
LOC110525119 LOC106585327 coding upstream 35270 21775601 ~ 21779162 (-)
tubb2b tubb2b coding upstream 151739 21892070 ~ 21894808 (-)
nr5a1a LOC106585443 coding upstream 475484 22215815 ~ 22231402 (-)
nr6a1a LOC106585444 coding upstream 524292 22264623 ~ 22378999 (-)
G484929 NA non-coding downstream 191923 21518135 ~ 21546445 (-)
G484888 NA non-coding downstream 197949 21421212 ~ 21540419 (-)
G484904 NA non-coding downstream 284229 21451333 ~ 21454139 (-)
G484863 NA non-coding downstream 351191 21386796 ~ 21387177 (-)
G484862 NA non-coding downstream 353907 21384189 ~ 21384461 (-)
G485307 NA non-coding upstream 68090 21808421 ~ 21808697 (-)
G485275 NA non-coding upstream 87269 21827600 ~ 21828319 (-)
G485278 NA non-coding upstream 88346 21828677 ~ 21829752 (-)
G485351 NA non-coding upstream 143075 21883406 ~ 21883617 (-)
G484895 LOC106585423 other downstream 303649 21431930 ~ 21434719 (-)
G484807 LOC106585304 other downstream 440195 21296580 ~ 21298173 (-)
LOC110525458 LOC106585411 other downstream 617301 21115008 ~ 21121728 (-)
G484409 NA other downstream 729286 21007016 ~ 21009082 (-)
G484232 NA other downstream 1129632 20588262 ~ 20608736 (-)
G485279 NA other upstream 93217 21833548 ~ 21834360 (-)
G485864 NA other upstream 520303 22260634 ~ 22263353 (-)
G485877 NA other upstream 540395 22280726 ~ 22281026 (-)
G486716 NA other upstream 1097322 22837653 ~ 22840566 (-)
G486953 NA other upstream 1510955 23251286 ~ 23258106 (-)

Expression


Co-expression Network