LOC110525501 (LOC106585453)


Basic Information

Item Value
gene id LOC110525501
gene name LOC106585453
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22627955 ~ 22636391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605656.2
GGACATCAGCACTCACAGACTAACAGCAGTGTTGGCACAGCAGAGGGATCCCTGCCACCCCTGCAGGAAGCCTACACAGGAaaaacacagtgagagagagagagagagagagagagagagagagagagggaggggtgagagagtgaTTAGTaacagaaagaagaggagaacagGATGCAGTGGAAGAGGGATTTTGCAGAGCAGTCAGCAGAGAGGTGAAAACAAACACAAGGAAAGACTGCTGTGTGACCAGATTCACAAGATGTAAAGCAGCTTCAGGAGGAACCCTGCCTGCTTGTTTGCCACTGATGCtctgcaacaacaacagcagaggACTTGTTGTATTTTCAAGGATAGTGAAGGTGGAAAGGTGCAATGTGAGAAGCCCTCCTGTGGCCAAGAGGATGACAAATTAGCCCTTATTCAgcaaggagagacaggagtgcTCCGAGGATCTGGAGATGCTGTCTACAGCTCAGCAGATGCTGCAGGACAGCCGTTCCAAGATCGAGCTGATCCGAATGCAGATTATCAAAGTCACCCAGACTGGTGTTGGGGATGGGAGCAGCAACCATGACAGCACCAATCATGGAGAAGGAAGTACCCCAGTGGGTGTAAATCCCCTGGACATCCATGTGTTTGAGTTAAAACACTAtgtccagagagagacagaggtggtgAAGGTGGCCAGGGATGTGGTGAAGCAGCTTGAGGAGCTGCCATCCCAGGACCAATTGGCCCTGGCTGAGGCCCGGTCCCGTGTGCAAGACTCTTCTCAGAAGCTAGATCTTCTGCGACTTTCTCTGGAGCACCGCCTGGGGGAGTCATCTCAGGAGGCTCTCCGGGAGCCTGTCACCAAGCAGGGGCTCCCTACAGTATACCCACCCCCTGAGGGACAACCGCAAAATTGCCTACTTtgctccttcccctcctccacctcctcatccttTCTCAAGCCTGCCTCCCTAACAGGCACACTTGAGGTCATGCTTCTGGGATGTGAGGACTTGCTGAAATCACTGCCAGGACGAGGCCAAATAACCAGTGGATCTTCTTCTCCGGAGAGCCCACCAGATTTCAATGTCAACAGCCAACCTGATCACACAGAAAACCTCTCCTTGGAGATAAGTGCAGTGTTGAAACTGGATAACAGAGTGGTGGGTCATACCCACTGGAGACCTTTGAGCAAGCAGGCCTGGAGACAAAGCTTCAGCATCCAACTGGAGCGGTCTCGGGAGCTAGAGATTGGGATCTACTGGCAAGACTGGAGGGTGATGTGTGCAGTCAAGTACCTGCGCCTGGAAGAGTTCCTGGACAACCAACGACATACCCTGTGTTTGTGCCTAGAGCCCCAGGGAACACTCTTCACTGAGATTACGTTTGTCAACCCTGTGATTGAGCGCCAACCCAAACTAAGGCGTCAGAGGTGCATTTTCACAAAAGAGAaagGGAAGAACTTCCTTCGTGCTGCCCAGATGAACATGAACTTTGCCACATGGGGTCATCTGATGATGAGTGTCCTGCCTCAATGTTCCTTTACCACTTTGAGTCCGTCTACTTCCTCTGATGTTGTGGTCAACCCCTCACCTTCTACCAATAAGGCCACTCGGTCAACCCCCCTACTGCCAGGTGAAGTGCCGGTGATTAGTCTTAACATAAGTGAGGAGCGTTTAGCATTTAAAACGTTTAGCGTTGACCAAGGAAGAAACATCCCCAACACGGTGTCAACAGCACAGAAAACACCACCTATGCCTACTCTGACAGAAAAAGAGTCCTCCATTGAAAACTACACAGAGAGAACAAGGATGCAGATGGAAGACTTCAAATGTATCTCTGTCTTGGGAAGAGGACACTTTGGAAAGGTACTTCTAGCTGAGTTGAAGAAGACAGGAAAACTCTATGCCATTAAAGCCTTGAAGAAGAGGGATATTGTAACCCGTGATGAAGTGGACAGTCTTATGTGTGAGAGGAGGATCTTCGAGATGATCAATGCATCGAGGCACCCTTTCCTGGTCAACCTGCACGGCTGTTTCCAGACCAGTGAGCATGTTTGTTTTGTCATGGAGTACTCACCAGGAGGAGACCTCATGATTCACATCCATAATAACGTCTTCTCTGAGTTGCAGACCAGGTTCTACTCAGCCTGTGTTTTGCTGGGTCTAGAGTTCCTGCATCTGAATAAGATAGTTTATCGAGATTTGAAGTTAGACAACTTGCTGATGGATGCAGACGGATTTGTTAAAATCACAGACTTTGGACTTTGTAAAGAAGGGATGGGGCATGGCGACCGGACATCAACATTCTGTGGAACCCCAGAGTTCCTGGCGCCTGAGGTGCTTACTGATGATAACTACACACGAGCTGTGGACTGGTGGGGCATGGGCGTCCTTATCTTTGAGATGCTTGTGGGAGAATCTCCATTCCCAGGAGAAGATGAAGAGGAGGTGTTTGACAGCATAGTCAATGATGATGTTCAGTATCCTGGATGCCTCTCTCCAGACTCCATCTCCATCATTCAAAAGCTTCTTAAGAGGAATCCAGAGAAAAGGCTGGGAGCCGGAGAAGGGGACGCAAATGAAGTCAAGGAAGAGAAATTCTTCAAGACTATAGACTGGGATGCACTGCTAGCTAAAAAAGTGAAACCTCCGTTCCTGCCAAAAATTAAGGAGTCTGTGGATGTCAGTAACTTTGACAGCGAGTTCACGAGTCTCCAGCCGATCCTGTCACCTCCTCCCGTGTCCTGCAGCCTCTCCCCTGAGCAGCAGGAGGCCTTCGCAGATTTTGACTTCTCAGCCCTGCATGGATGAAGCAATCAGAGACCAGGGTTGCATCCAGCTCATGAAACAGTTGCATGAACAGTTCCATAGCACAACCTTTTCATAACTGACAATAACTGAATGTAGCTCGCCCCAACGGTACATGTAGATGAGGCGGACTGTCCTCACTGCCATCAAAAGCCATCATCAACCAACTCAACCAAGCAGGATATGGGATATGTGCAGGTAGAAAGTAATTTGAATGCAACCCTGGTATTTCTGTGCCATGAATTAGTCTGACGGCCAGGTTCTATGACTGTTTCATTGTTTATAGTACCCAGTGATATCCAAACATTAACACTAGTGTGTAATGCTCTGGATTTCACTCAAATACAATTGGCTGCCATCTACGAAACATAACAGATTTGATGAGCGGTCTAATGTGGACAGAATTTGAGCATGCTTTGTGGCCTTTGCTTATTTTGCTATTATCAGATAACTGTTCCCTTTAGAGAGGTACACGCTGCCATTTCTATGCATCACTGTGAGAGGCTTTGCCCACTGCCTTGACTGAGCAAATGAAAAAGGCTATTTATTCCTGTTACAATgtcttttcaaaatgttgttctGTGTGAAGATGAAAAATTCCATGTTCTCATATCTGGGTCCAGTCATTCCCTACCAATGTGTGTTTAACTACTAACTCCTACTAACATATCTACTTTCTACCTACCAGCCAATTTATTATTTTTAGTGTGACTAAAATGTGCATGGCACACTTGTTGTGAACTTAGTTTTATGTAGACATTTTCATGAGAGAAGCCATTAAATAAGGTAGCCATATTTATGAATAAACCAATATTGTGGGATTGAGCACTTAATGCAATAACGAGTGAGATTGTGAAGTGAGAGGCTGATAGTTGATTATGATAGAAATAGTATTTATTTTGCTATTAAAACGATTCAATAGTTGCTGCTAATAATTATGCAttactgtatgaatgtatgtGGATTACCACAAAGAAATGTATATGAGACAAAATGAATGCATATTCATTGAAATCATTAGTGTTTTATTGTGTTGTCTATgtcaataaatacaaaaatatgaa
>XM_021605657.2
GGACATCAGCACTCACAGACTAACAGCAGTGTTGGCACAGCAGAGGGATCCCTGCCACCCCTGCAGGAAGCCTACACAGGAaaaacacagtgagagagagagagagagagagagagagagagagagagggaggggtgagagagtgaTTAGTaacagaaagaagaggagaacagGATGCAGTGGAAGAGGGATTTTGCAGAGCAGTCAGCAGAGAGGTGAAAACAAACACAAGGAAAGACTGCTGTGTGACCAGATTCACAAGATGTAAAGCAGCTTCAGGAGGAACCCTGCCTGCTTGTTTGCCACTGATGCtctgcaacaacaacagcagaggACTTGTTGTATTTTCAAGGATAGTGAAGGTGGAAAGGTGCAATGTGAGAAGCCCTCCTGTGGCCAAGAGGATGACAAATTAGCCCTTATTCAgcaaggagagacaggagtgcTCCGAGGATCTGGAGATGCTGTCTACAGCTCAGCAGATGCTGCAGGACAGCCGTTCCAAGATCGAGCTGATCCGAATGCAGATTATCAAAGTCACCCAGACTGGTGTTGGGGATGGGAGCAGCAACCATGACAGCACCAATCATGGAGGAAGTACCCCAGTGGGTGTAAATCCCCTGGACATCCATGTGTTTGAGTTAAAACACTAtgtccagagagagacagaggtggtgAAGGTGGCCAGGGATGTGGTGAAGCAGCTTGAGGAGCTGCCATCCCAGGACCAATTGGCCCTGGCTGAGGCCCGGTCCCGTGTGCAAGACTCTTCTCAGAAGCTAGATCTTCTGCGACTTTCTCTGGAGCACCGCCTGGGGGAGTCATCTCAGGAGGCTCTCCGGGAGCCTGTCACCAAGCAGGGGCTCCCTACAGTATACCCACCCCCTGAGGGACAACCGCAAAATTGCCTACTTtgctccttcccctcctccacctcctcatccttTCTCAAGCCTGCCTCCCTAACAGGCACACTTGAGGTCATGCTTCTGGGATGTGAGGACTTGCTGAAATCACTGCCAGGACGAGGCCAAATAACCAGTGGATCTTCTTCTCCGGAGAGCCCACCAGATTTCAATGTCAACAGCCAACCTGATCACACAGAAAACCTCTCCTTGGAGATAAGTGCAGTGTTGAAACTGGATAACAGAGTGGTGGGTCATACCCACTGGAGACCTTTGAGCAAGCAGGCCTGGAGACAAAGCTTCAGCATCCAACTGGAGCGGTCTCGGGAGCTAGAGATTGGGATCTACTGGCAAGACTGGAGGGTGATGTGTGCAGTCAAGTACCTGCGCCTGGAAGAGTTCCTGGACAACCAACGACATACCCTGTGTTTGTGCCTAGAGCCCCAGGGAACACTCTTCACTGAGATTACGTTTGTCAACCCTGTGATTGAGCGCCAACCCAAACTAAGGCGTCAGAGGTGCATTTTCACAAAAGAGAaagGGAAGAACTTCCTTCGTGCTGCCCAGATGAACATGAACTTTGCCACATGGGGTCATCTGATGATGAGTGTCCTGCCTCAATGTTCCTTTACCACTTTGAGTCCGTCTACTTCCTCTGATGTTGTGGTCAACCCCTCACCTTCTACCAATAAGGCCACTCGGTCAACCCCCCTACTGCCAGGTGAAGTGCCGGTGATTAGTCTTAACATAAGTGAGGAGCGTTTAGCATTTAAAACGTTTAGCGTTGACCAAGGAAGAAACATCCCCAACACGGTGTCAACAGCACAGAAAACACCACCTATGCCTACTCTGACAGAAAAAGAGTCCTCCATTGAAAACTACACAGAGAGAACAAGGATGCAGATGGAAGACTTCAAATGTATCTCTGTCTTGGGAAGAGGACACTTTGGAAAGGTACTTCTAGCTGAGTTGAAGAAGACAGGAAAACTCTATGCCATTAAAGCCTTGAAGAAGAGGGATATTGTAACCCGTGATGAAGTGGACAGTCTTATGTGTGAGAGGAGGATCTTCGAGATGATCAATGCATCGAGGCACCCTTTCCTGGTCAACCTGCACGGCTGTTTCCAGACCAGTGAGCATGTTTGTTTTGTCATGGAGTACTCACCAGGAGGAGACCTCATGATTCACATCCATAATAACGTCTTCTCTGAGTTGCAGACCAGGTTCTACTCAGCCTGTGTTTTGCTGGGTCTAGAGTTCCTGCATCTGAATAAGATAGTTTATCGAGATTTGAAGTTAGACAACTTGCTGATGGATGCAGACGGATTTGTTAAAATCACAGACTTTGGACTTTGTAAAGAAGGGATGGGGCATGGCGACCGGACATCAACATTCTGTGGAACCCCAGAGTTCCTGGCGCCTGAGGTGCTTACTGATGATAACTACACACGAGCTGTGGACTGGTGGGGCATGGGCGTCCTTATCTTTGAGATGCTTGTGGGAGAATCTCCATTCCCAGGAGAAGATGAAGAGGAGGTGTTTGACAGCATAGTCAATGATGATGTTCAGTATCCTGGATGCCTCTCTCCAGACTCCATCTCCATCATTCAAAAGCTTCTTAAGAGGAATCCAGAGAAAAGGCTGGGAGCCGGAGAAGGGGACGCAAATGAAGTCAAGGAAGAGAAATTCTTCAAGACTATAGACTGGGATGCACTGCTAGCTAAAAAAGTGAAACCTCCGTTCCTGCCAAAAATTAAGGAGTCTGTGGATGTCAGTAACTTTGACAGCGAGTTCACGAGTCTCCAGCCGATCCTGTCACCTCCTCCCGTGTCCTGCAGCCTCTCCCCTGAGCAGCAGGAGGCCTTCGCAGATTTTGACTTCTCAGCCCTGCATGGATGAAGCAATCAGAGACCAGGGTTGCATCCAGCTCATGAAACAGTTGCATGAACAGTTCCATAGCACAACCTTTTCATAACTGACAATAACTGAATGTAGCTCGCCCCAACGGTACATGTAGATGAGGCGGACTGTCCTCACTGCCATCAAAAGCCATCATCAACCAACTCAACCAAGCAGGATATGGGATATGTGCAGGTAGAAAGTAATTTGAATGCAACCCTGGTATTTCTGTGCCATGAATTAGTCTGACGGCCAGGTTCTATGACTGTTTCATTGTTTATAGTACCCAGTGATATCCAAACATTAACACTAGTGTGTAATGCTCTGGATTTCACTCAAATACAATTGGCTGCCATCTACGAAACATAACAGATTTGATGAGCGGTCTAATGTGGACAGAATTTGAGCATGCTTTGTGGCCTTTGCTTATTTTGCTATTATCAGATAACTGTTCCCTTTAGAGAGGTACACGCTGCCATTTCTATGCATCACTGTGAGAGGCTTTGCCCACTGCCTTGACTGAGCAAATGAAAAAGGCTATTTATTCCTGTTACAATgtcttttcaaaatgttgttctGTGTGAAGATGAAAAATTCCATGTTCTCATATCTGGGTCCAGTCATTCCCTACCAATGTGTGTTTAACTACTAACTCCTACTAACATATCTACTTTCTACCTACCAGCCAATTTATTATTTTTAGTGTGACTAAAATGTGCATGGCACACTTGTTGTGAACTTAGTTTTATGTAGACATTTTCATGAGAGAAGCCATTAAATAAGGTAGCCATATTTATGAATAAACCAATATTGTGGGATTGAGCACTTAATGCAATAACGAGTGAGATTGTGAAGTGAGAGGCTGATAGTTGATTATGATAGAAATAGTATTTATTTTGCTATTAAAACGATTCAATAGTTGCTGCTAATAATTATGCAttactgtatgaatgtatgtGGATTACCACAAAGAAATGTATATGAGACAAAATGAATGCATATTCATTGAAATCATTAGTGTTTTATTGTGTTGTCTATgtcaataaatacaaaaatatgaa

Function

NR:

description
serine/threonine-protein kinase N2-like isoform X2

GO: NA

KEGG:

id description
K23691 PKN2; serine/threonine-protein kinase N2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605656.2 False 3868 mRNA 0.46 19 22627955 22636391
XM_021605657.2 True 3865 mRNA 0.46 19 22627955 22636391

Neighbor

gene id symbol gene type direction distance location
LOC110525500 LOC106585450 coding downstream 10389 22593509 ~ 22617566 (-)
LOC110525497 LOC106585448 coding downstream 48557 22572786 ~ 22579398 (-)
LOC110525498 shlb2 coding downstream 55394 22550214 ~ 22572561 (-)
LOC110525495 LOC102784428 coding downstream 163594 22460769 ~ 22464361 (-)
LOC110525493 LOC106585445 coding downstream 170207 22441244 ~ 22457748 (-)
LOC110525506 LOC106585454 coding upstream 7761 22642795 ~ 22646088 (-)
ptgesl LOC106585457 coding upstream 46194 22682585 ~ 22692496 (-)
derl3 derl2 coding upstream 90694 22727085 ~ 22730428 (-)
LOC110525508 LOC106585459 coding upstream 94116 22730507 ~ 22746609 (-)
LOC110525513 LOC106585307 coding upstream 122245 22758636 ~ 22759601 (-)
G486612 NA non-coding downstream 12578 22615099 ~ 22615377 (-)
G486594 NA non-coding downstream 39760 22587974 ~ 22588195 (-)
G486586 NA non-coding downstream 47749 22580000 ~ 22580206 (-)
G486575 NA non-coding downstream 84319 22543363 ~ 22543636 (-)
G486573 NA non-coding downstream 87144 22540602 ~ 22540811 (-)
G486623 NA non-coding upstream 363 22636754 ~ 22636967 (-)
G486642 NA non-coding upstream 30380 22666771 ~ 22667052 (-)
G486643 NA non-coding upstream 31425 22667816 ~ 22668420 (-)
G486647 NA non-coding upstream 37822 22674213 ~ 22674454 (-)
G485877 NA other downstream 346929 22280726 ~ 22281026 (-)
G485864 NA other downstream 364602 22260634 ~ 22263353 (-)
G485279 NA other downstream 793595 21833548 ~ 21834360 (-)
G484895 LOC106585423 other downstream 1193236 21431930 ~ 21434719 (-)
G484807 LOC106585304 other downstream 1329782 21296580 ~ 21298173 (-)
G486716 NA other upstream 201262 22837653 ~ 22840566 (-)
G486953 NA other upstream 614895 23251286 ~ 23258106 (-)
G487022 bicdl1 other upstream 749143 23385534 ~ 23385907 (-)
G487016 NA other upstream 753626 23390017 ~ 23392062 (-)
LOC110525180 hps4 other upstream 946645 23582127 ~ 23587892 (-)

Expression


Co-expression Network