LOC110525530 (LOC106585473)


Basic Information

Item Value
gene id LOC110525530
gene name LOC106585473
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23029762 ~ 23049799 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605718.2
aaaatagtggagtagggtggtatTATTATAACCTTTTTTGTTAGTGTAGTGTTATGGcatgtgtttatttatttgtcaAGCAAAGTATATAGTAGGTGGTGGTAATGCAATATATTGGATGCCAGCCGCCGTGAAACCTCCTCAAAGAAGAAGTAATGAGATGGACGTCAGCAGTCACAAGACCACAACAGAGTAGATAACTCTGGCTCGCTCCCCCAGTCGCAGATGTGTATAATGTGGGCTGTTCTACAGGCACGATGGCTATGACAAACTTGGAACGTCTGTTGGGATCTGGATGTGTGATCTCCGTTGAATTACGGCACAGGCGTCACTAAATTTGCAAGAACTCTTCAGACTAAAGAATACACGTCTCGTCTGGGGGCGTTATCACATCAGCTTGCGCGCggctttgtctgtgtgtggctaATGTTATTGTCAGGTTATCTAGCTGACTAGTCCAAGCATCACAGTAGAACGCTAGCAAGACAATATTGTGTGGTTACATCGGCgctaaactagctagcttggCGCTTTAGTAGGAGCTGGTGTGTATGTGATGTTCTCCGTACTTTCGTACGGTAGACTTGTTGCCAGAGCTGTTATTGGCGGACTCTCTCAAACGGATAGCGGTGACTACAGCCTGGTAACGGCAAGATGCGGGTTTGGGAAGGATTTTCGAAAAGGTATCTTGAAGAAAGGGATGTGCTATGGCGACGACGCTTGCTTTATTGCCCGACATAGATCTGCCGATGTTTTGGGCGTTGCAGATGGGGTGGGGGGTTGGAGAGACTACGGGGTGGACCCATCCCAGTTTTCAGGGACCCTGATGAAGACGTGTGAGCGGCTGGTAAAGGAGGGACGCTTTGTTCCAGGCAACCCTGTGGGCGTCCTCACAAGCAGCTACTACGAGCTCCTACAGAACAAAGTGCCTCTGCTAGGCAGCAGCACGGCCTGTATCGTGGTGCTGGACCGGCAGAGTCACAGGCTGCACACAGCCAACCTGGGAGACTCTGGCTTCCTGGTGGTGCGGGGAGGAGAGGTAGTGCACCGCTCTGATGAACAGCAGCATTACTTCAACACCCCCTTCCAGCTCTCTATCGCCCCGCCTGAGGCAGAGGGGGCTGTCCTCAATGACAGTCCTGATGCTGCAGACAGCTCCTCCTTTGACGTCCAGTTGGGGGACATCATTCTCACAGCCACAGATGGCCTCTTCGACAACATGCCCGAACACATGATCCTACAGGAGTTGAGAAAACTCAAGAACACTAACTATGAGAGTATCCAGCAGACAGCCAGGAGCATTGCAGAGCAGGCCCATGTTCTGGCATACAACCCCAACTACATGTCACCTTTTGCACAGTTTGCCTGTGACAATGGACTGAATGTAAGAGGAGGAAAGCCAGATGACATCACTGTGTTGCTGTCAATAGTGGCAGAGTACACAAACTAGAGACTGTATGGAGGCTAGTAGGGAAATTAGGAGTTTCCTCTTGTCTGCCTCTTAAAGATGTCAGACTGCTTTGGTTCCTGCTGGCGGGGATTAAGGACTGATGTTGGTGGCTGAGCTGCCCTCCTGAGACCATAATTCCTCCAGGATTCAATCAGGCCCATCTCTCAGATGGAACACTGACAATACATGCACTGACTTCACCATCAGAACTGAGTGTTAATCTTTAATAGACTGAAGACATGGATGAATAAAGCAGAGGGTTGTCTGACatctgctaggctacctgctgcaaaGTATCGATCTTGGAAAGTCTCTAGTTGTCTTTGACCTAATCCCTGTTCAATGGGATAAAGGATGTAGTCGTGTTGAAGCTCTGGCTCTCACATGAGGAACAAGTCTGTTATTTGGGCTGTAAAACAAAGCCCAGAAGGTAGAGATTAAGAATCTGGGTCAGTAGTAGCCAGTCAAAAGTTGATTGGGTCAGAAATGAAAATCTATGGATCGTACATGTGAGTGTTCCATCATGAGCTGATTTGAAGACCGTAAGTAACATCGGAATACGATACTGAAAGAGAGCGGCTCTCCAGTTAGACTGGTCCATGACTCGCTGACCCCTGTCCCGGTCAGAGGAATAAGGCAACCTCAGAGTTATCTACAATAGAGAACTTTAGTTCAAGAGGACATATGAGATGGATGTGGTTATGTACAGAGATGAGAGAttaatgaatatactgtacataataaACATTGCATGAGAATAAAAGGAGTAATAGCACAAGCAATAATAATATTGACTGTATAAGATGATGACATAAGCAAAGGACTTGTATAACACAGAATCCATTATAACAACAAGCAATAGTAACAAACAGTAAATCTTCAAGGTTCAATATCATCACTCACCACTGTCCACACACTCATCACTCTTGTCCACTTGGAGAAAGACTGAGGAGGCAGGACTGTCAGGTGTCCTGCCCTCTAGCAACATATTGGTGATCTAGTAGCAGGGGATCCCTTAGTCTCTCTGGTACCAGCAGGGATTGGTAGAGTGAGCTGCATAAAGTTAGAGAACTCACAGGCAGGAGAATCCTTAAGATCTACCATCAAGTCTGAATAATAAGGCCTCGAAAAACAACTTTCAGTGACTCagattaaacaaatcaaattaatAATAAATTATATTGAAGGGCAAGCTTTTTTATGTAGGCATAAGGGCATGTGTCTATGTGATGTGAATGAATGTTGTTGAAATGTTTTGGTCGATTTTTGGACAAGTGACATTTTAAGTTTGACTGATCTAATGGATTGTATGAAGACCAGGTGCCGTTGCTGCATATCAGTTTCTGATTGTTCACTGGAAGCGCTACTTTGTCCcaggcctgctgttttcaactctttttctctcactctcaacgctctgctatgaaaagccaactgatatttactcACAAGGTGTTAtactgttgcaccctctataaccactttGGTTatgactctgctggtcatctatgaccGTTTAAACGTCTTTAAGAACGAtatggccttaatggccatgtactgttataatcgccacccggcagagcctggttcctctaggtgaTTCCAGCCTTtctagagtttttcctagccactgtgcttctacatctgcattacttgctctttggggttttaggctgggaatCTGTCTAGCACTTTGACGACTGCTCTTGCAAAatgggctttataaaatacatttgagtgCAATTTAGGTTGTACATGGACCAAGTTAATTGTTTCTAAGAATGGGACATTTTGACTTGATGTTTCTGTTAAACCTatcaatttttatttgtcacatacacatggttagcatgcgagtgtagcaaaatgcttgcgcagtttcctaggaacgcgaagtgaggtggccatctctgtcggcgccggaagtactcACTCCTGCTGTGATGCAAAGGGTGTGACTGCAAGTGATGTGGAAGGTTATTGTGTGATATAGTAACCTCTAGCCTGTCTGATTTTATATTGTATACATGTTGAATGTTTATTTTATCTAGGCTACACAGCTTTCTTCAGTATCCACTGGGATGCAATGGTAATGACCATTTACGCACAAGGTTAAAGAAAGCATATCTGAAAGCTCACAGTGGATGTTGGTCAGGTGACCATGTTTTTTTTAACTTGTTTGGTGGGAATCTGGACTGCGCACAGCTTCAATTTAGCTTTAGGCATAATTGTTCACAATCAGCATTTCCTTGTCTCATCAGTTGCCCCTGCTGTAAAGCTCCAATAGGACATTTCATTAAGTGATAATAATCAGGTCACTTATTTCATCTTTAATTGCAGATTTTCATTGTGCATTTACAACATGTGTGCAGCAACATTTTAAGAGTAACATGTGTTATGCACATGTTGATTTAAACTAATGAACACAGAGCAGAAACTGACAAGTAGCCATATTTCACACTTTTCCCACCATGCCCTGCTGTCTTAATTTACGCCATCTGATCGGAGACCTCTCATTCCCTTTCAATGTGTTCAATGCTTTTCACCATGGGACATATGTGAATGAAcaagctattattattatttttaaggcTTGAAAAAGTATGACATGATCTTAGAATCCTTCATATTCTGTGTATCATCTGAGGTACCCTTGGTGGTGTTCTTGTTGATGTAATGGTGCACCCTCACTGAAGGCTACTGTCCTGCTTCAAGGGCTCTCCCCTAACTAGGAAAAAAATGATTGGCTATCAGGTGTTTCATCATTAACAATACCCTGCATGCCTTTCATATTGCGCAGGGAGATGAAAGGCATCTGCACTGGATGACAAATGTTTTTGTAAGCATTATGGCACTAGAGGTTGACAACCTCACCAACCTTAAAGTACAAGCAATTCTCCCTGTCAGATGGCACTATATCAAAGCTAGCTTCCCCATGATGTCCATGTCTGGCTCTCCACTGGCCTAGTGACCTGACCAGACAGTTTTGTTCTGTTGGCCAATTCTAGACTTCAGTTCAAAAAGCAAAGTTTGTTATAATGAGAGCTGCTTGTATCTTTATTTTGATTGTACAGTTCAATGCAGAGGCAGGTTCTATTAAACATGTTTTCAAAGCTGTCAAATTTAAATAAAGTATAGTATTTATTA
>XM_021605719.2
ATtaaaatagtggagtagggtggtatTATTATAACCTTTTTTGTTAGTGTAGTGTTATGGcatgtgtttatttatttgtcaAGCAAAGTATATAGTAGGTGGTGGTAATGCAATATATTGGATGCCAGCCGCCGTGAAACCTCCTCAAAGAAGAAGTAATGAGATGGACGTCAGCAGTCACAAGACCACAACAGAGTAGATAACTCTGGCTCGCTCCCCCAGTCGCAGATGTGTATAATGTGGGCTGTTCTACAGGCACGATGGCTATGACAAACTTGGAACGTCTGTTGGGATCTGGATGTGTGATCTCCGTTGAATTACGGCACAGGCGTCACTAAATTTGCAAGAACTCTTCAGACTAAAGAATACACGTCTCGTCTGGGGGCGTTATCACATCAGCTTGCGCGCggctttgtctgtgtgtggctaATGTTATTGTCAGGTTATCTAGCTGACTAGTCCAAGCATCACAGTAGAACGCTAGCAAGACAATATTGTGTGGTTACATCGGCgctaaactagctagcttggCGCTTTAGTAGGAGCTGGTGTGTATGTGATGTTCTCCGTACTTTCGTACGGTAGACTTGTTGCCAGAGCTGTTATTGGCGGACTCTCTCAAACGGATAGCGGTGACTACAGCCTGGTAACGGCAAGATGCGGGTTTGGGAAGGATTTTCGAAAAGGTATCTTGAAGAAAGGGATGTGCTATGGCGACGACGCTTGCTTTATTGCCCGACATAGATCTGCCGATGTTTTGGGCGTTGCAGATGGGGTGGGGGGTTGGAGAGACTACGGGGTGGACCCATCCCAGTTTTCAGGGACCCTGATGAAGACGTGTGAGCGGCTGGTAAAGGAGGGACGCTTTGTTCCAGGCAACCCTGTGGGCGTCCTCACAAGCAGCTACTACGAGCTCCTACAGAACAAAGTGCCTCTGCTAGGCAGCAGCACGGCCTGTATCGTGGTGCTGGACCGGCAGAGTCACAGGCTGCACACAGCCAACCTGGGAGACTCTGGCTTCCTGGTGGTGCGGGGAGGAGAGGTAGTGCACCGCTCTGATGAACAGCAGCATTACTTCAACACCCCCTTCCAGCTCTCTATCGCCCCGCCTGAGGCAGAGGGGGCTGTCCTCAATGACAGTCCTGATGCTGCAGACAGCTCCTCCTTTGACGTCCAGTTGGGGGACATCATTCTCACAGCCACAGATGGCCTCTTCGACAACATGCCCGAACACATGATCCTACAGGAGTTGAGAAAACTCAAGAACACTAACTATGAGAGTATCCAGCAGACAGCCAGGAGCATTGCAGAGCAGGCCCATGTTCTGGCATACAACCCCAACTACATGTCACCTTTTGCACAGTTTGCCTGTGACAATGGACTGAATGAGGAAAGCCAGATGACATCACTGTGTTGCTGTCAATAGTGGCAGAGTACACAAACTAGAGACTGTATGGAGGCTAGTAGGGAAATTAGGAGTTTCCTCTTGTCTGCCTCTTAAAGATGTCAGACTGCTTTGGTTCCTGCTGGCGGGGATTAAGGACTGATGTTGGTGGCTGAGCTGCCCTCCTGAGACCATAATTCCTCCAGGATTCAATCAGGCCCATCTCTCAGATGGAACACTGACAATACATGCACTGACTTCACCATCAGAACTGAGTGTTAATCTTTAATAGACTGAAGACATGGATGAATAAAGCAGAGGGTTGTCTGACatctgctaggctacctgctgcaaaGTATCGATCTTGGAAAGTCTCTAGTTGTCTTTGACCTAATCCCTGTTCAATGGGATAAAGGATGTAGTCGTGTTGAAGCTCTGGCTCTCACATGAGGAACAAGTCTGTTATTTGGGCTGTAAAACAAAGCCCAGAAGGTAGAGATTAAGAATCTGGGTCAGTAGTAGCCAGTCAAAAGTTGATTGGGTCAGAAATGAAAATCTATGGATCGTACATGTGAGTGTTCCATCATGAGCTGATTTGAAGACCGTAAGTAACATCGGAATACGATACTGAAAGAGAGCGGCTCTCCAGTTAGACTGGTCCATGACTCGCTGACCCCTGTCCCGGTCAGAGGAATAAGGCAACCTCAGAGTTATCTACAATAGAGAACTTTAGTTCAAGAGGACATATGAGATGGATGTGGTTATGTACAGAGATGAGAGAttaatgaatatactgtacataataaACATTGCATGAGAATAAAAGGAGTAATAGCACAAGCAATAATAATATTGACTGTATAAGATGATGACATAAGCAAAGGACTTGTATAACACAGAATCCATTATAACAACAAGCAATAGTAACAAACAGTAAATCTTCAAGGTTCAATATCATCACTCACCACTGTCCACACACTCATCACTCTTGTCCACTTGGAGAAAGACTGAGGAGGCAGGACTGTCAGGTGTCCTGCCCTCTAGCAACATATTGGTGATCTAGTAGCAGGGGATCCCTTAGTCTCTCTGGTACCAGCAGGGATTGGTAGAGTGAGCTGCATAAAGTTAGAGAACTCACAGGCAGGAGAATCCTTAAGATCTACCATCAAGTCTGAATAATAAGGCCTCGAAAAACAACTTTCAGTGACTCagattaaacaaatcaaattaatAATAAATTATATTGAAGGGCAAGCTTTTTTATGTAGGCATAAGGGCATGTGTCTATGTGATGTGAATGAATGTTGTTGAAATGTTTTGGTCGATTTTTGGACAAGTGACATTTTAAGTTTGACTGATCTAATGGATTGTATGAAGACCAGGTGCCGTTGCTGCATATCAGTTTCTGATTGTTCACTGGAAGCGCTACTTTGTCCcaggcctgctgttttcaactctttttctctcactctcaacgctctgctatgaaaagccaactgatatttactcACAAGGTGTTAtactgttgcaccctctataaccactttGGTTatgactctgctggtcatctatgaccGTTTAAACGTCTTTAAGAACGAtatggccttaatggccatgtactgttataatcgccacccggcagagcctggttcctctaggtgaTTCCAGCCTTtctagagtttttcctagccactgtgcttctacatctgcattacttgctctttggggttttaggctgggaatCTGTCTAGCACTTTGACGACTGCTCTTGCAAAatgggctttataaaatacatttgagtgCAATTTAGGTTGTACATGGACCAAGTTAATTGTTTCTAAGAATGGGACATTTTGACTTGATGTTTCTGTTAAACCTatcaatttttatttgtcacatacacatggttagcatgcgagtgtagcaaaatgcttgcgcagtttcctaggaacgcgaagtgaggtggccatctctgtcggcgccggaagtactcACTCCTGCTGTGATGCAAAGGGTGTGACTGCAAGTGATGTGGAAGGTTATTGTGTGATATAGTAACCTCTAGCCTGTCTGATTTTATATTGTATACATGTTGAATGTTTATTTTATCTAGGCTACACAGCTTTCTTCAGTATCCACTGGGATGCAATGGTAATGACCATTTACGCACAAGGTTAAAGAAAGCATATCTGAAAGCTCACAGTGGATGTTGGTCAGGTGACCATGTTTTTTTTAACTTGTTTGGTGGGAATCTGGACTGCGCACAGCTTCAATTTAGCTTTAGGCATAATTGTTCACAATCAGCATTTCCTTGTCTCATCAGTTGCCCCTGCTGTAAAGCTCCAATAGGACATTTCATTAAGTGATAATAATCAGGTCACTTATTTCATCTTTAATTGCAGATTTTCATTGTGCATTTACAACATGTGTGCAGCAACATTTTAAGAGTAACATGTGTTATGCACATGTTGATTTAAACTAATGAACACAGAGCAGAAACTGACAAGTAGCCATATTTCACACTTTTCCCACCATGCCCTGCTGTCTTAATTTACGCCATCTGATCGGAGACCTCTCATTCCCTTTCAATGTGTTCAATGCTTTTCACCATGGGACATATGTGAATGAAcaagctattattattatttttaaggcTTGAAAAAGTATGACATGATCTTAGAATCCTTCATATTCTGTGTATCATCTGAGGTACCCTTGGTGGTGTTCTTGTTGATGTAATGGTGCACCCTCACTGAAGGCTACTGTCCTGCTTCAAGGGCTCTCCCCTAACTAGGAAAAAAATGATTGGCTATCAGGTGTTTCATCATTAACAATACCCTGCATGCCTTTCATATTGCGCAGGGAGATGAAAGGCATCTGCACTGGATGACAAATGTTTTTGTAAGCATTATGGCACTAGAGGTTGACAACCTCACCAACCTTAAAGTACAAGCAATTCTCCCTGTCAGATGGCACTATATCAAAGCTAGCTTCCCCATGATGTCCATGTCTGGCTCTCCACTGGCCTAGTGACCTGACCAGACAGTTTTGTTCTGTTGGCCAATTCTAGACTTCAGTTCAAAAAGCAAAGTTTGTTATAATGAGAGCTGCTTGTATCTTTATTTTGATTGTACAGTTCAATGCAGAGGCAGGTTCTATTAAACATGTTTTCAAAGCTGTCAAATTTAAATAAAGTATAGTATTTATTA

Function

NR:

description
protein phosphatase PTC7 homolog isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K17508 PTC7, PPTC7; protein phosphatase PTC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605718.2 False 4597 mRNA 0.44 6 23029762 23049796
XM_021605719.2 True 4593 mRNA 0.44 6 23029762 23049799

Neighbor

gene id symbol gene type direction distance location
anapc7 LOC106585471 coding downstream 31695 22992473 ~ 22998067 (-)
LOC110525519 LOC106585467 coding downstream 94610 22897262 ~ 22935152 (-)
LOC110525523 LOC106585466 coding downstream 134739 22848530 ~ 22895023 (-)
LOC118965095 NA coding downstream 140476 22889095 ~ 22889286 (-)
LOC110525528 LOC106585464 coding downstream 181524 22842480 ~ 22848238 (-)
LOC110525529 ppp1cc coding upstream 11232 23061031 ~ 23064135 (-)
LOC110525124 LOC106585475 coding upstream 173296 23223095 ~ 23315185 (-)
LOC110525535 LOC106585482 coding upstream 347225 23397024 ~ 23410695 (-)
LOC110525536 LOC106585483 coding upstream 361257 23411056 ~ 23446557 (-)
LOC110525537 pxn coding upstream 409741 23459540 ~ 23490066 (-)
G486815 NA non-coding downstream 19047 23006134 ~ 23010715 (-)
G486817 NA non-coding downstream 41060 22986914 ~ 22988702 (-)
G486721 NA non-coding downstream 202037 22814253 ~ 22827725 (-)
G486727 NA non-coding downstream 248207 22780003 ~ 22781555 (-)
G486692 NA non-coding downstream 288556 22740944 ~ 22741206 (-)
G486949 NA non-coding upstream 162897 23212696 ~ 23214656 (-)
G486952 NA non-coding upstream 182318 23232117 ~ 23232587 (-)
G486953 NA non-coding upstream 205070 23251286 ~ 23258106 (-)
G487001 NA non-coding upstream 300894 23350693 ~ 23351167 (-)
G487005 NA non-coding upstream 305716 23355515 ~ 23355898 (-)
G486716 NA other downstream 189196 22837653 ~ 22840566 (-)
G485877 NA other downstream 748736 22280726 ~ 22281026 (-)
G485864 NA other downstream 766409 22260634 ~ 22263353 (-)
G485279 NA other downstream 1195402 21833548 ~ 21834360 (-)
G484895 LOC106585423 other downstream 1595043 21431930 ~ 21434719 (-)
G487022 bicdl1 other upstream 335735 23385534 ~ 23385907 (-)
G487016 NA other upstream 340218 23390017 ~ 23392062 (-)
LOC110525180 hps4 other upstream 533237 23582127 ~ 23587892 (-)
LOC110525552 LOC106585495 other upstream 664076 23713875 ~ 23717830 (-)

Expression


Co-expression Network