LOC110525124 (LOC106585475)


Basic Information

Item Value
gene id LOC110525124
gene name LOC106585475
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23223095 ~ 23315185 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979640.1
gtctgaagtgttgcaaggatcggaccaaaacgcagcgtgATTAGTGGCTACAACCCTCAGCTCTCTAGATAAGACGTGTCCTGCTCCCTTGAAACAAACTCTTATACACTAAATGCAGAGGACATTGAGATACAAAACACATGTCACAGATGGAACAGGAGATCTCTCTAGTCCAGAGTAAGATGTCTGATCTGGAGTCAGTACTGCAGCAGAAGGATGTGGAGCTGAAAGCCTCGGAGACACAGAGGACCATCCTGGAGCAAGACCTGGCTACCTACATCACAGAGTGTAACagtctGAAGCTTAGTCTGGAGCAGGCCCGTATGGAGGTTTCCCAGGAAGACGACAAGGCACTGCAGCTCCTCCACGGCATCCGGGAGCAGAGCAACAAGCTGCAGGAGATTAAAGAACAGGAGTATCATGCCCAGCTGGAGGAGATGCGCGTGGCCATCAGGCAGCTGGAGGAGGACCTGTCTGCGGCCCGTCGTCGTAGCGACCTGTATGAGTCGGAGCTGAAGGAGTCCCGTCAGACCAGCGAAGAGCTGAAGAGGAAAGCAGCAGACTGTCAACAAAGGATGCAGAAGGCCAAGGAGCAAGGAAAAACTGATACAGAGGAGCTTCTGTCAAAGCTGGAGAAGACCAATGCTGAACAGAAAGTGAAAATTGAGGATCTCCAAGATAAGCTTTCCAAGGCAGTGAAGGCGAGTAGGGAGACCACAGATCTCCTCTATAGTATCAGGGTGGCTAAGGAGCGCATGGAACATGAGCTGGAGATGCTTCAGACCAAGGAGGACTCCAGTGACAGCCTCCGGAGACGCCTAAGAGAGACAGAGgaTGGCAGGAGGACCCTGGAGAGCCAAGTGAAGAGGCTGGAGATAGTTGAGCGCAGGGAGAGTAAGCTGAAGGAGGACATGCAGAGCAAGGCCCAGCAGGTCCAGCAGATGACGGATCAAATCATGGACCTGGAGGAGAGTCTGCGTGAGAGCCAGTCCACAGCCCAACGCGTGGAGACCCACCTGGAGCACAAGGAGAAGCTTTATGAAGAGAAGATCAAGGTTCTGGAGAACCAGATGAAGGCAGGCATGGCAGATAAGGAGATGCTGGAATCCAGTCAGAGCAAGTATGAGGAGGAGGTCCAGGAGAAGTGCAGCATCATCAGTGAGCAGAAGGCGACCATAAACGCCATGGACTCAAAGATGGCCAGCCTGGAGCAGAGGATTACTGAGCTATCTGAGGCCAACAAACTGGCAGCCAACAGCAGCATCTACACCCAGAAGAACATGAAAGCCCAGGAGGAGATGATCTCGGAGCTGAGACAACAGAAGTTCTACCTGGAGTCTCAGGCTGGGAAACTAGAGGCCCAGAACGCCAAGCTGGAAGAGCACCTGGAGAAGatgagtcagcaggagcagagcAACAAGAGCCGAGTGCTGGAGCTGGAGAACAGgctgagagagATGGGCCTTGAGCATGAGGAGCAGAAGCTGGAGATCAAGCGTCAGGGGACGGAGCTGACTCTGTCGTTACAGGAGAGGGTTTCTCAGATCAGTGGGCTACAAGCAGCACGCCAATCCCTGGAAAGTCAGCTGCAGCAGGCCAAATCAGAGCTCGAGGACACCACCGCTGAggctgaggaggaaatctgtgttctTAGAGCCCACCGAGACGAGATCCAGCGCAAGTATGATGCCCTCAGAGACAGCTGTGCGGTGATCACAGACCTGGAGGAGCAGCTGACCCAGCTGACCCAGGAGAACTCTGAGCTGAACCGTCAGAACTTCTACCTGTCCAAGCAGCTGGACGAGGCCACGGACGAGACAGAGGACCGCCTGCATCTGGGTCAGGATGTGGACCGCCTCCGCCACGAGGTGGCTGACCGCGAGATGCACCTCAACAACCAAAAACAGAACATTGAGACACTGAAGACCACGTGCACCATGCTGGAGGAGCAGGTCCTGGAGCTGGAGACTCTGAATGATGAGCTGCTGGAGAAGGAGAGGCAATGGGATGCCTGGAGGGGAGCCCTGGAGGAAGAGAAGAACCAGGCTGAGAGGAGGACCAGGGAGATCCAGAGACTGCTGGACAACGAGAAGCagaacagGCTACGTGCTGACCTGCGCAACTCGGAGGCTCGTCAGTCTATTGAGCAGGCAGTGAAGGAGCACAAGGCTGAGATTCTGGCCCTGCAGGAGGCCCTCAAGGACCAGAAACTCAAAGCAGAGAGCCTCTCTGACACAcTGAATGACCTGGAGAAGAAGCATGCCATGCTGGAGATGAATACAAGGAGTCTGCAGCAGAAGCTGGAGACTGAGAGGGAGCAGAAGCAGAGGCTGCTGGATGACCAAGGAAACCTGCAGCAGCAGTTAGATGTTCAGAAGAGCCACATCTTCCGGCTAACCCAGGGGCTGCAGGATGCTGTGGACCAGACTGACCTGCTGAAGACTGAGAGGACTGACCTGGAGTACCAGCTGGAGAACATCCAGGCTGTGTACTCCCATGAGAAAGTGAAGTTGGAGGGGACCATCACCCAGCAATCCAAACTCATAGACTTCCTCCAGGCCAGGGTGGACCAGGGGGGCTCTAAGAAGAAAAAGGGTCTATTTGGGCGGCGCAGAGAGGACCTGCTGGCTGCCATGGCAGCCCAGGGCCAGTCCCAGGTGCCCCAGCAGGTATCCCCTGCACCCTCCATGAAGCCGGTGCCCCTGCAGTACAGTGACATGAAAGTGTCCCTGGACAAGGAGCGCTCCCGCTGCTCTGAGCTGGAGGATGCACTGCAGAAGATGAGACTGGAGCTGCGCTCCCTACGAGAGGAGGCGGTCCAGTACAAACCTGTGGACCATGGTGGTACCCCTGACACCCCTGCCACAACGCGGCAGCAGAAGATGTCTGCCGTGGTGAAGTCTCCTGAGCACCAGCAGGGCCCGAGCAACCTGCTGGCTACCTCGATCTCTGGCCGCAGGAAGGAGGCTGCCCCCCCAGAGGAGTACGGCCATCGCATGAaggacagtcagagagacagggaaagggggaggcagagggagagcgTTCACCACAACACCCCTCACCGCTTCACTGTGGGACTCAACATGAGGGCTGCCAAGTGTACTGTGTGTCTGGATACTGTGCACTTCGGTCGTCAGGCAGCCACCTGTATCGAATGTCACGCTTTGTGCCATCCAAAATGCTCCCGCTGTCTTCCTGCTGCGTGTGGCATGCCTGGGGACTGTGCCTTGCATATGGCTGAGGGGCTGTGCCGGGACAAAGGCAGTTCCCCTGGCCTGCAGCTCAAAGAGGCCAGTGGACATGTTCACCTGGAGGGGTGGATGAAGCAGCCCAGGAATGTGAAGCGTGGCCAGGGCTGGGAGAAGAAGTATGTGGTGCTGGATGGGACCAAGGTGACCATCTACGAAACAGAGCCCAGAGAAGAGTCAGTGAAGCCGTTGGAGGAGTTTGAGCTATGTCTGTCTGATGTAGACTTGATGGTGCATGGTGCTGTAGGTGCGTCTGAGCTGCCCAACACCGCCAAGTCAGacgTGCAGTATGTGCTAAAACTGGAGTCCCACCCCCACACCTCGTGCTGGCCCGGACAGACTCTGTACTTCATGGCTCCCAGTTTCCCAGATAAACAGCGCTGGGTGGCCGTGCTGGAGTCTGTGGTGGCAGGGGGGCGAGCATCCCGGGAGAAGGCTGAGGCAGATGCAAAACTGCTGGGGAACTCTCTGCTGAAGCTGGAGGGTGATGACAGACTTGACATCAACTGTACTCTCCCCCTCACAGACCAGATAGTGTTAGTGGGCTCTGAGGAGGGTCTGTACGCCCTGAATCTGATCAAGAACTCCCTGACCCACATCCCTGGCCTGGGCTCCGTCTTCCAGATCCACATCATGAAAGAACATGAAAAGCTGCTGATGATTGTTGGGGATGAGAGGGCGCTGTGTCTGGTGGAGATTAAAAAGGTGAAGCAGTCTCTGGCCCAGTCCCACCTGCCTGCCCAGTCTGAACTGGAACCATTTATCTTTGAGACGGTCAAGGGATGCCACCTCTTCTCTGCAGGCAGAATAGATAATGGGCCTTGTATCTGTGCTGCAATGCCGAACAAGATTACAATTCTGCGTTACAATGATAACCTCAACAAGTTCTGCATTCGCAAGGAGATAGAGACTCTGGAGCCCTGCAGCTGCCTCCACCTGACCAGCTACAGCATCATCATCGGCACCAACAAGTTCTATGAGGTTGAGATGAAGCAGTATGTTCTGGAGGAGTTCCTGGATAAGAAGGATGTGTCTCTGGCCTCGGCGGTGTTTGCTTCCTCCTGCCACAGCTTCCCCATCTCCATAATGCAGGTCACCAGCACTCTGCAGAAGGAGGAGTACCTGCTCTGCTTCCATGAGTTTGGAGTGTTTGTGGACGCATATGGACGAAGGAGCCGCACTGAAGAGATCAAATGGAGTCGTCTGCCCCTGGCCTTCGCTTACAGAGAGCCCTACCTGTTTGTGACATATTTTAACTCTTTGGATGTGATCGAGGTCCAGGGACATGCTGCTCTTGGCCCTCCAGTGCTAGCCCACCTGGACATCCCTAACCCCCGTTACCTGGGTCCAGCCATCTCTTCTGGGGCCATCTACCTGGCCTCCTCCTACCAGAACAAGCTGCGGGTCATCTGCTGCAAGGGCAACCTGGTCAGGGAGTCTGGGGAGTTGCAGAGGACCGGCTCTAGCCGCGGCAGCCCCAGTAAGAGAGGACCACCTACATACACAGAGCACATCTCCAAGCGTCTGGCCTCGGGCCCTAGCAGCCATGAGGGGCTTCACCGTGAGCCCAGCACACCACACCGCTTCCGGGAGGGCCGAACTGAGTTCCGGCGGGACAAGTCCCCGGCGCGCCCCCTGGACAGAGAGAAGTCCCCAGGCCCCAGACTGGACAGCCGCAGAGAGAGGTCCCCTGGGAGGTTTGACGACCGCCAACGTCTCCACTCTGGCTCTGACCGCCGCACACAGCTCACCCCTGTCAACAAGGTGTGGGACCAGTCATCTGTGTGAGTAACACAAGGAGAGGTTTAGGAGAGAGGAGCTGTGTGATCCTCTGTCCACATGGCTACACCATCTAAGGGTGACAAACCAGAAAACCCATCGCCTGTATATAGTGCAATCTGGATTCATATGCCAACACACTATTGCACTGGGGAAATGTCCTTTGACAATCTTGTCTTTTCTTATATGTGTATTCATTGCTATGGTCCTATGGCAGATAGTTGTTCAACAGAGCAGCATTAGCAGGGAACCCCTGTGGATCTAATGGGTCGAGGATATGAACCTTTATAAGTACTAAAATCAAAGTTGTAAATATTGTTCCAGTTTTTATAGCAAAAGGGAATAGTAGGCTGGTACAGCCAAGTCTATATTTTTTAAGGACGTATTTCTAATGATGTTGCAGGGAGAGAAATCTCATCTCAAAATCTCATCATCATCCCAGATGCAATACTGTAATTTTTGCTTTTCTCTGGACGGTCAATCATGCCAACATTTAATCACCCATGTACTGTACAAATAATATGGGTTCCGAGAAGGCAATACTCATGAGCTTTTCACTTTGTACTTGAGATTAAGGGCTCTAGTCAATCTGCATCGCAGAAATTCAgctttacagcgtgattgaaatttatAAGCAATGTTAGTGgtttagcggagactgcattcacggtaaacactgCATGTCGGCTCAATctgaaatgacctttacatttctatcatGGAATCTATAACACTTCAGCTTTAAagactgaatagagccctaactGTGCAGGATTCCAAATTCATTGTTTCTACATGACCAGTCTTCTTTTTGATTAAATGGACTTTGATATCTAATCGCATATGATTGTTTAATAACAGTTAGTCTTACCATACTAATGGACAAAATAAATGTTAAGTATATTTAATACAAGGAACACTTGTAGCCTAAGAAGAATAAGACGCCTATAAACTTAGTCTTTGATTTGAACCAGCAGGCAGTGGAGCTGCTTATTATGGTACAGATGTCCTGTTCTTACTTCTGTGCAGTGAACTAACTATGAAGTCCAGTAATCGTCAGGGTTCGTCACTATTAATCGCTTCTTTTTCAATTGATAAAATATGATATTTGTCACATCAGAAGAGCATGAGTCATTTAGAGCAGCAGTTGCTTTTTTTACCTTGATTTTTGCTTTGTGTTTCTGTCATGTAGTCACATGAATTTGTATTCAATAAGTATACATTGTTGCAAGACAACTAAAAGGTTTTTGTACATACATTAAAGATGATTGACCTACCCTGGCAATGTGTCAAGATATGTACCATACATCTTACATATTTTCATTTTGCATGAGAAACTATTCCGGCTAGCAAATAACACATGGAAATAGCCCACTTTATTTTCCTTTATTTCTACATCAATGTAATGCTCTTTAAAGTaaattcaacaaaacaaaaataaacatacTAAACAAAAAGAGCACTTGTTGTTACAAGAAACTGCTATGTCCTGTTACAGGAAACGGCTACAAAGTCCTCTGCGACCGACGATACATGAGAAGGATGAAAGTGCTTGTTAAAGATAACTGTAAAGGAGGAAAACAAATCAAAAGCACATTAGTTATCCCTTTattacacaggaggttggtggcaacttaattggggaggacgggctcatggtaatagCTGGAGCGGGAATAGTATCAAATAgattaaacacatggtttccatgtatttgatgccattccatttgcgctGGTcgggccattattatgagccgtctctCAGCAGACTCCACTGCTTTGTTAAAGACCTGTATAAGAACTGCTTGGCACCAGTTTCCCTCTGACACACACGCTCAGAAACACTTGCATTTACACCGGATTCCTGGGCCATTGCAGGGATGCCTCCTATGGGGAACTACGTGGTGGACAGCTTCTTAAATCACACGAGGGAAGAGAAATGAAAGCCCAAGAATATCAAAATAACTCAAACCCAACTGGACAAAGTGTAGGGGCTCCTCCAGACAGACAAAGTGTAGGGGCTCCTCCAGACAGACAAAGTGTAGGGGCTCCTCCAGACAGACAATGTGTAGGGGCTCCTCCAGACAGAAAGTGTAGGGGCTCCTCCAGACAGACAATGTAAATCCTCCACATACTCATCATATCCAGCTATGTCCCACAACAGCACCAAAAGAAAAACAGGCTCATCCCTCATGGGAGTCCTTCTGTGGGTGACATAATACTGACTCATTTTCAGCTTTATTGTTTGATGTATTTCTGTAGCAGTGTCTACTTTAACTGAAATGCTATGCAAAACAACGAATGGTGAAACTGCCCTACAAGCCTCTAGCCTCGCCATGCCAGAGTGCAACAGGGACACTAATGGAAGCCAGAAGGAAATGAGTGTCTAAAGGAGCATTACTCTGAACCTAATTTAGCCCTCAATGTCAAACCTCAGTTTGGGAAAGTATGACCAGAAAGACCCACATGGCTTTGAGATCTGAAGCTATGGACTACTTAGTCCAGCCATTGAAATGTACACAGTATAAGCTATTCAGGGGGTCATTGAAAGAGATCAACAGTCAAGAGTTTGGTCTAAGCCCTCAGATGGTTTACAAGATGGCTGTCCAAACTATACATGGCTCTTTCACACAGTCTGCTGATCAGGTAGAGAGTTGTGAATAATAACAATTGCTGAAATCCCGTGATTCATTTGTGTCCTGCTAGTACGACAAGTGGCATTATTAATGATTGGCAGTCTTGAAGGATATCATTTTGGACATCGTATAGGGTTGTATTTGTACATTTAATGCTCGTAAAACCCAAAAATCATTAATAACAAAAAGGCCAATATTGATGGCGAACAACTGAAAAGCAAATATCAACTACTACAAGCACAGTGAGAATATCTGTGTGCATGTACGAGTGTGTGGAGCTCCTGTCTGTATGGTAGAGGTAGtgtgtacatgtactgtatatgagtGGGGTATGCGTGACCGTATGTGAGTGGGAGGTGGGGGTATAGTATTAGGTTGTTGTTTCGGACCACCATTCTGTCAGTGCATGGGAATCTCACCGATTTGGGCCATCTTTTCTCACGGCCCTTCAGATCCACTACTGATAAACACGGATTATCCTGTGGCAATGTAATTGTCTAAATTTGAGACAGCAATTCAAGAATACAACATCAATAAATAATGAAAACAGGTACTGATCGCAATCAAATGGAAAACCACTGCAGCATCAAAACAGGAACATGCCCccttaaaaaaataaagattCCCGTTTCCAACAGGTTGAAATTATAGTTTTTTCCAGCAATCAGCAAAAAGATAGAAATGAAAAGGTTTATGGTGACTAATTTGGTAAGCCACTATAAAAGGATTCTTCTATACATCGTTTCTTAAACGCTATATACTTATCTGAATATATTATTTATGTTGCAAAAATGTATCTGAGAGGAGTTTATTGAAGAGAGATGAAATAAGTGACTTCTCAATTCAGCAGGAGAAAACCGAGCTAACCAGCTAAGAGAACAACACTGGATGTTCCACAGAGACAAGGTACTATACATTTCATCCCCTTGTACTATCCAGCACTTCCTCGGTTTATATAGGACATGACGCAATGGTGGTTGAGGATGTTCAAAGGGAAAGATTGTGATGCGTGTATGACTCAACTTCATATTTTAGGGCTGTTTCATTATGCTCAACTAATAGCAAGGAAGTTAGTTACTAAATAAGCAGTCAGTGTTGGGTAATAAATTCACCCATCCTGCAGATGAGGACACATTGGTAAATGAGTTCCTGTCATCACAGGAGGACACTGAGACAGTAACATGACTAAAGCACATCCTTTAGTGACCCCATGACAACCATTACACCACTTCCTATTAAACCCTGGTTGTGATGGATTGAACGTGATGTCATGTCCAAGTGCCTGCTGGGTAAATTGGGGGGGGGGTCATCCTAATTTGAAGTGATGGGTAAATGAATGCATTTCCACAGCCTCTCCTCAAGTTTATTTAGGTCTCTGAAAACAAGTGACAATGCCAAATTAAATTtatgccgtgttcaaaacaa

Function

NR:

description
PREDICTED: citron Rho-interacting kinase-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979640.1 True 9093 mRNA 0.49 39 23223095 23315185

Neighbor

gene id symbol gene type direction distance location
LOC110525529 ppp1cc coding downstream 158960 23061031 ~ 23064135 (-)
LOC110525530 LOC106585473 coding downstream 173296 23029762 ~ 23049799 (-)
anapc7 LOC106585471 coding downstream 225028 22992473 ~ 22998067 (-)
LOC110525519 LOC106585467 coding downstream 287943 22897262 ~ 22935152 (-)
LOC110525523 LOC106585466 coding downstream 328072 22848530 ~ 22895023 (-)
LOC110525535 LOC106585482 coding upstream 81839 23397024 ~ 23410695 (-)
LOC110525536 LOC106585483 coding upstream 95871 23411056 ~ 23446557 (-)
LOC110525537 pxn coding upstream 144355 23459540 ~ 23490066 (-)
LOC110525539 NA coding upstream 175349 23490534 ~ 23492812 (-)
LOC110525016 LOC106585485 coding upstream 179519 23494704 ~ 23497340 (-)
G486949 NA non-coding downstream 8439 23212696 ~ 23214656 (-)
G486815 NA non-coding downstream 212380 23006134 ~ 23010715 (-)
G486817 NA non-coding downstream 234393 22986914 ~ 22988702 (-)
G486721 NA non-coding downstream 395370 22814253 ~ 22827725 (-)
G486727 NA non-coding downstream 441540 22780003 ~ 22781555 (-)
G487001 NA non-coding upstream 35508 23350693 ~ 23351167 (-)
G487005 NA non-coding upstream 40330 23355515 ~ 23355898 (-)
G487008 bicdl1 non-coding upstream 43994 23359179 ~ 23360028 (-)
G487021 NA non-coding upstream 62846 23378031 ~ 23378339 (-)
G487023 NA non-coding upstream 71096 23386281 ~ 23386649 (-)
G486716 NA other downstream 382529 22837653 ~ 22840566 (-)
G485877 NA other downstream 942069 22280726 ~ 22281026 (-)
G485864 NA other downstream 959742 22260634 ~ 22263353 (-)
G485279 NA other downstream 1388735 21833548 ~ 21834360 (-)
G484895 LOC106585423 other downstream 1788376 21431930 ~ 21434719 (-)
G487022 bicdl1 other upstream 70349 23385534 ~ 23385907 (-)
G487016 NA other upstream 74832 23390017 ~ 23392062 (-)
LOC110525180 hps4 other upstream 267851 23582127 ~ 23587892 (-)
LOC110525552 LOC106585495 other upstream 398690 23713875 ~ 23717830 (-)
G488386 NA other upstream 1038348 24353533 ~ 24353823 (-)

Expression


Co-expression Network