Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965071 |
| gene name | LOC106585477 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24578705 ~ 24579373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110512255 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052405.1 | True | 352 | mRNA | 0.41 | 3 | 24578705 | 24579373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965019 | LOC106585477 | coding | downstream | 12381 | 24557487 ~ 24566324 (-) |
| ncor2 | LOC106585520 | coding | downstream | 74582 | 24317912 ~ 24504123 (-) |
| ccdc92 | LOC106585518 | coding | downstream | 354445 | 24211144 ~ 24224260 (-) |
| dtx1 | LOC106585516 | coding | downstream | 394336 | 24129400 ~ 24184369 (-) |
| LOC110525317 | dgcr6 | coding | downstream | 499657 | 24072614 ~ 24079048 (-) |
| ep400 | LOC106579917 | coding | upstream | 18597 | 24597970 ~ 24634358 (-) |
| LOC110525585 | LOC106585524 | coding | upstream | 76415 | 24655788 ~ 24715090 (-) |
| piwil1 | piwil1 | coding | upstream | 293850 | 24873223 ~ 24885005 (-) |
| LOC110525589 | LOC106585529 | coding | upstream | 332254 | 24911627 ~ 24917852 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 593488 | 25172861 ~ 25375482 (-) |
| G488468 | NA | non-coding | downstream | 35810 | 24542366 ~ 24542895 (-) |
| G488463 | NA | non-coding | downstream | 37065 | 24540846 ~ 24541640 (-) |
| G488462 | NA | non-coding | downstream | 39280 | 24539224 ~ 24539425 (-) |
| G488454 | NA | non-coding | downstream | 57068 | 24521312 ~ 24521637 (-) |
| G488448 | NA | non-coding | downstream | 64795 | 24513624 ~ 24513910 (-) |
| G488487 | NA | non-coding | upstream | 13169 | 24592542 ~ 24596060 (-) |
| G488505 | NA | non-coding | upstream | 61152 | 24640525 ~ 24640755 (-) |
| G488506 | NA | non-coding | upstream | 62585 | 24641958 ~ 24642184 (-) |
| G488507 | NA | non-coding | upstream | 62844 | 24642217 ~ 24642779 (-) |
| G488508 | NA | non-coding | upstream | 64336 | 24643709 ~ 24644217 (-) |
| G488386 | NA | other | downstream | 224882 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 860922 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 993151 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1186643 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 1192798 | 23385534 ~ 23385907 (-) |
| G489038 | NA | other | upstream | 526832 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 917590 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1700334 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1876359 | 26455731 ~ 26457883 (-) |
