LOC110525653


Basic Information

Item Value
gene id LOC110525653
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 27734995 ~ 27737024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473790.2
TTGAATTCTAAAGGTGGGCTACTTCCAAAATACCCATTATTTAAAAGCATGTACTTCCCTACAAGAACTCCAGTAGAATTACATTACAATCCAGTCTACATTGGTGTGAATCATTGGTGTGAATCTTTGGTGTGAATCATGAGGTCCTTGGCCCTAGCTTTAATTCTGTGTGCACTACTTCCACTGTTCCATGCTTATTGCTACAGGAAAGCTATGACCTCTGACCCGGGCAAAACCCATTGTCGTGACGACAAGGACAAGACATGGCATCCTGCTGGTTCCCGCTGGAGGAACAGTGATTGCATGAACTGTGATTGTTTAGAATGCTGCCAGGGGTATATGACTCCCATAGATTTTCCTGATGATTGCATGAAGGAGTGGGACCAAAAGGCATGTGAATTCAAGGTGGTTAAGAAGAGTGATCCCTCCATTTCATGCCCTGTCTTCGGCTCTGTGGGGAAGTGAATTGTTTACTTCGCTGTGTTCTCAGTATACAATGAATAAAATATGTTGTCAGCTTACTTTGTGTCAAATGTGAATGTTCTGGTGTCTGACGAATTGGATTGGTTGAAATGAAATGGTAAAAACATCATGATACAAATGAAAAATAAAGATACGTGTTAGTGTGCAA
>TU559251
GCATGTACTTCCCTACAAGAACTCCAGTAGAATTACATTACAATCCAGTCTACATTGGTGTGAATCATTGGTGTGAATCTTTGGTGTGAATCATGAGGTCCTTGGCCCTAGCTTTAATTCTGTGTGCACTACTTCCACTGTTCCATGCTTATTGCTACAGGAAAGCTATGACCTCTGACCCGGGCAAAACCCATTGTCGTGACGACAAGGACAAGACATGGCATCCTGCTGGTTCCCGCTGGAGGAACAGTGATTGCATGAACTGTGATTGTTTAGAATGCTGCCAGGGGTATATGACTCCCATAGATTTTCCTGATGATTGCATGAAGGAGTGGGACCAAAAGGCATGTGAATTCAAGGTGGTTAAGAAGAGTGATCCCTCCATTTCATGCCCTGTCTTCGGCTCTGTGGGGAAGTGAATTGTTTACTTCGCTGTGTTCTCAGTATACAATGAATAAAATATGTTGTCAGCTTACTTTGTGTCAAATGTGAATGTTCTGGTGTCTGACGAATTGGATTGGTTGAAATGAAATGGTAAAAACATCATGATACAAATGAAAAATAAAGATACGTGTTAGTGTGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473790.2 False 631 mRNA 0.41 4 27734995 27737024
TU559251 True 584 TUCP 0.42 4 27734996 27736978

Neighbor

gene id symbol gene type direction distance location
LOC110525649 LOC106585595 coding downstream 10992 27714131 ~ 27724003 (-)
LOC110525648 LOC106585594 coding downstream 29285 27652785 ~ 27705710 (-)
LOC110525644 LOC106585592 coding downstream 156474 27561557 ~ 27578521 (-)
LOC110525643 LOC106585590 coding downstream 174439 27545608 ~ 27560556 (-)
LOC110525639 LOC106579858 coding downstream 383104 27342945 ~ 27351891 (-)
LOC110525654 LOC106585600 coding upstream 61246 27798270 ~ 27812882 (-)
LOC118965072 LOC106579843 coding upstream 80552 27817576 ~ 27820202 (-)
LOC110525655 LOC106585601 coding upstream 95228 27827231 ~ 27885634 (-)
LOC110525658 LOC100195761 coding upstream 291152 28028176 ~ 28044300 (-)
LOC110525659 LOC106585607 coding upstream 307781 28044805 ~ 28105169 (-)
G492195 NA non-coding downstream 5704 27729057 ~ 27729291 (-)
G492192 NA non-coding downstream 7803 27726821 ~ 27727192 (-)
G492134 NA non-coding downstream 21629 27713091 ~ 27713366 (-)
G492188 NA non-coding downstream 22386 27712370 ~ 27712609 (-)
G492157 NA non-coding downstream 89287 27645075 ~ 27645708 (-)
G492229 NA non-coding upstream 33574 27770598 ~ 27770807 (-)
G492235 NA non-coding upstream 38574 27775598 ~ 27775805 (-)
G492207 NA non-coding upstream 39532 27776556 ~ 27776947 (-)
G492208 NA non-coding upstream 54851 27791875 ~ 27793746 (-)
G491539 NA other downstream 490802 27216607 ~ 27244193 (-)
G491291 NA other downstream 867837 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 1183368 26481087 ~ 26551627 (-)
tmem230b LOC106585554 other downstream 1277154 26455731 ~ 26457883 (-)
LOC110525606 LOC106585545 other downstream 1451826 26271759 ~ 26283169 (-)
G494389 LOC106585296 other upstream 1674191 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 1741631 29411204 ~ 29483533 (-)
LOC110525684 LOC106585295 other upstream 1765229 29502192 ~ 29520980 (-)
G494542 NA other upstream 1938299 29675323 ~ 29675573 (-)

Expression


Co-expression Network