LOC110525683


Basic Information

Item Value
gene id LOC110525683
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29414761 ~ 29415342 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473811.2
AAGAAATCACTATATTTTTGGTCTAATGTGAATAGGTAAGAGGGTAGCGCGAGTGATGATGGAGCGAGCACCTGTTAAAAGTGGCTCCCATCGTCAACACTCACAGGGCTAAGAGGAGGTGCTATTCTAGTGACTCCAACAATAAGGACAGGAGTCAAACCACATCATTAGTGTAAATAATGGATTTCATTATCACAGCTTTTTTTCACTGGATCTCAAAGCACTACATGTACTAGCTTGGTCACTGACAGAGGTTAACAGGTATTTGTACTAGCTTGGTCACTGACAGAGGTTAACAGGTATTTGTACTAGCTTGGTCACTGACAGTGCTTAACAGGTATTTTTACTAGCTTGGTCACTGACAGTGCTTAACAGGTATTTGTACTAGCTTGGTCACTGACAGTGCTTAACAGGTATTTTTACTAGCTTGGTCACTGACAGTGCTTAACAGGTGTTTTTCATAAATACATGGTTCTTAAAGCATACTATCAATCAATACTTTATAGAATAGGCAGGCAAGTGATATTGAACAAACATTCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473811.2 True 544 mRNA 0.39 2 29414761 29415342

Neighbor

gene id symbol gene type direction distance location
LOC110526490 LOC106580375 coding downstream 15873 29070716 ~ 29398888 (-)
LOC110525679 LOC106585622 coding downstream 344749 29023208 ~ 29070012 (-)
LOC110525678 LOC106585621 coding downstream 404045 28989407 ~ 29010716 (-)
zgc:153044 dus18 coding downstream 858748 28552264 ~ 28556013 (-)
ube2d4 UBE2D4 coding downstream 946896 28455590 ~ 28467865 (-)
LOC110525684 LOC106585295 coding upstream 86850 29502192 ~ 29520980 (-)
LOC110525685 LOC106585294 coding upstream 111441 29526783 ~ 29575598 (-)
LOC110526522 LOC106585290 coding upstream 180074 29595416 ~ 29596809 (-)
LOC110525693 NA coding upstream 234861 29650203 ~ 29654088 (-)
LOC110525694 LOC106585282 coding upstream 290717 29706059 ~ 29754403 (-)
G494378 NA non-coding downstream 7045 29399840 ~ 29407716 (-)
G494376 NA non-coding downstream 20854 29393704 ~ 29393907 (-)
G494359 NA non-coding downstream 40483 29374023 ~ 29374278 (-)
G494357 NA non-coding downstream 45538 29368975 ~ 29369223 (-)
G494356 NA non-coding downstream 46328 29368154 ~ 29368433 (-)
LOC110525681 hectd4 non-coding upstream 37242 29411204 ~ 29483533 (-)
G494401 NA non-coding upstream 40017 29455359 ~ 29455568 (-)
G494402 NA non-coding upstream 43939 29459281 ~ 29459582 (-)
G494404 NA non-coding upstream 48549 29463891 ~ 29464214 (-)
G494496 NA non-coding upstream 195481 29610823 ~ 29611022 (-)
LOC110525655 LOC106585601 other downstream 1579459 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1677783 27734995 ~ 27737024 (-)
G491539 NA other downstream 2170568 27216607 ~ 27244193 (-)
G491291 NA other downstream 2547603 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 2863134 26481087 ~ 26551627 (-)
G494542 NA other upstream 259981 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 1111344 30526034 ~ 30527686 (-)
G495554 NA other upstream 1130060 30545402 ~ 30549450 (-)

Expression


Co-expression Network